Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00456 ATGGGTCAAGAATTTTCTCACGAAGGGGTTAATAGCGAGCATACATCATATGATCAATATGAGCAGGAGGAAGAAAAACATGAGGAAATTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGAGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTACAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGACTTTGAAGGCCTTGGAAATGACACATTTGATAATAACTTGGATGACCACATGAACATTGAAGATGACTCATTAAGTGCTTCCTACAGTAGCAATGAAGTGCTATTAAATCAGACAGCTAGGGATGTTGCCTATGTACAATGGCCAAGTGCTGCAATGATGAATGCACATTCATATGACCAATTTAGGCATGCTGTTTTCCAGGCTTCGTTTGGTCAACAGCCGTTGAGCTTTGACTATTCACAAAACTACTAG 930 0.4215 MGQEFSHEGVNSEHTSYDQYEQEEEKHEEIDVDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGALKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRCGYSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALANQAGGYDFEGLGNDTFDNNLDDHMNIEDDSLSASYSSNEVLLNQTARDVAYVQWPSAAMMNAHSYDQFRHAVFQASFGQQPLSFDYSQNY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00456 309 MobiDBLite consensus disorder prediction 1 16 - -
Aip02g00456 309 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Aip02g00456 309 MobiDBLite consensus disorder prediction 1 28 - -
Aip02g00456 309 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 191 - -
Aip02g00456 309 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 22 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00456 Aip-Chr2 6447199 6449387 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g00456 FAR1 9.8e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00456 - - ahf:112723376 454.136