Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00455 ATGGAGAAGAAGCAGAAGAGCATTGACGACATCCTCCCTCTTGACCTGATTCACAGAATCTTACTGAGAGTGCCGGCCAAGCATCTCGCTCGTCTCAGGTGCGTTTCGAAGCTCTGGTACTCTCTAATTTCCGATCCACAATTTGCGGAATTGCATTTTCACAACTCTCCCGCAGCCACCAACGCAACCATCTTCATAGACCACATAAACCGCACTGTGGCTTACTTCGTTTACTTAGAAGCACTATTTAGTGACGACATTGATACATCACCCGTAAAAGTGGTGCCTCCCCCTTTCAAGAAGAAAAAGCCACCTACTGATTTTGAGTTCCTGGGATCCTGCAGAGGCTTTGTTCTTTTACATCGAGACCCACATTTTCTTGTGGTATGGAACCCACTGACTGGATACAGCAAAAGAATATCCTACTCTCGTATTGCTTCTCGTTGTGTGTACAAGGATATTAGCCTTCCCTGCAAGTTCTATCTGTATGGATTTGGTTATGATGCTTCACAGGATGACTACGTAGTTGTTGTAGCTTGGCAGGATAAGGATTACCATTATCACTTGGATTACTTGTCCTTGAGAACCAATTCATGGATTAATCTCGATGCTGCATTCTCCAAACCCTCGGGTGTTTTTGACATCAATTCTTGTGGGTTGTTCTTGAATGGTGCTATTCATTGGCTGCCTCACTCTCCTAAAACTTTTAGGGATGCTATTCTTATCTTTGATCTGAAGGAGAGGACTTTTTCAAGGATATCTGGGCCGGAACAACCTGTAATGAGTGCATTCTCCTATTCAAATCTCGCCCTACTAGGAGGCTGCCTAGCCTTGTATTATCGCAATGATTTTAGCCATAACACTCACATATGGGTGATGAAAGAATATAAAGTGCACTCATCTTGGACTCTCCATGAGATTCCTTGCAAAGTCTATCAGCTATTCTGCTTATCCAGTGATGGTGATATTATTGTAAGAGGTTATGATGAAGTAGAAGTAGAAGTAGAGAGTCTCTTGCCATTTCCTAGTGACATTAAGGATAAGGATAAGAAGAAGAAGATGAAAAAGAAGAGGAAGGAAAACAGTGTCATGCAATGGTCTTTCAACTTGATTTTATTCAAGTATTTCCTAGTTTTAGGATTAGCTTTTAGATATATTTTTAAGCTGAAGGCTTACTTCTCCATATTGAATATCAATTACACCGTGGGTGGGTTTGTTTTCCAGGGAAAGTTGCGGATTGGTGTGGCTGAGCAAACTCTCTTAGCTGCATTAGGCCAAGCAGCAGTACAGAGTGAAGAACATTCTAAACCACCTGCTGGTATTAAATCTCCTTTGGAAGAGCTagctccacggctttcctag 1362 0.4134 MEKKQKSIDDILPLDLIHRILLRVPAKHLARLRCVSKLWYSLISDPQFAELHFHNSPAATNATIFIDHINRTVAYFVYLEALFSDDIDTSPVKVVPPPFKKKKPPTDFEFLGSCRGFVLLHRDPHFLVVWNPLTGYSKRISYSRIASRCVYKDISLPCKFYLYGFGYDASQDDYVVVVAWQDKDYHYHLDYLSLRTNSWINLDAAFSKPSGVFDINSCGLFLNGAIHWLPHSPKTFRDAILIFDLKERTFSRISGPEQPVMSAFSYSNLALLGGCLALYYRNDFSHNTHIWVMKEYKVHSSWTLHEIPCKVYQLFCLSSDGDIIVRGYDEVEVEVESLLPFPSDIKDKDKKKKMKKKRKENSVMQWSFNLILFKYFLVLGLAFRYIFKLKAYFSILNINYTVGGFVFQGKLRIGVAEQTLLAALGQAAVQSEEHSKPPAGIKSPLEELAPRLS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00455 453 Gene3D - 406 452 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Aip02g00455 453 PANTHER OS02G0783600 PROTEIN 11 341 - -
Aip02g00455 453 TIGRFAM F_box_assoc_1: F-box protein interaction domain 113 308 IPR017451 -
Aip02g00455 453 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 11 341 - -
Aip02g00455 453 SMART fbox_2 12 52 IPR001810 GO:0005515
Aip02g00455 453 Pfam F-box domain 12 47 IPR001810 GO:0005515
Aip02g00455 453 MobiDBLite consensus disorder prediction 431 453 - -
Aip02g00455 453 ProSiteProfiles F-box domain profile. 12 56 IPR001810 GO:0005515
Aip02g00455 453 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 407 444 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Aip02g00455 453 Pfam F-box associated 219 303 IPR006527 -
Aip02g00455 453 SUPERFAMILY F-box domain 8 58 IPR036047 GO:0005515
Aip02g00455 453 Gene3D - 10 48 - -
Aip02g00455 453 SUPERFAMILY Galactose oxidase, central domain 28 328 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00455 Aip-Chr2 6424163 6426898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00455 406 449 Core DNA Replication Machinery Family AT1G08130 68.182 4.06e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00455 - - adu:107473098 491.5