Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00451 ATGGCTCCATCATTAGAGAGCAATAAAAATGTTGTTATTGATGATGAATCCAATAAGAATCTTCTTAAAGAAGAAGAAGAAGATGGAATGCTTTTTGCAATGGACTTGGGGATTTTAGTGGCGTTTCCAATGGCTGTTAAGACTGCATTTGAGCTTGGAATCTTCGACATAATGGCCAAAGATGAAAATGATCAAGAACATGAGCTTATTGCATCTCCTCAAAAGATTGTGTATAGTCTTACAGCTGCTGCTTCCAAATATTTTGTGACTGATGATGATGGTGTCAATTTTGGACACACTTTGAGCTTGATTCTGGATAAGGTTTTCTTGGAAAGCTGGTCAGTTGAACTGAAAGGAGCAATATTGGAAGGAGGTGTGCCATTTGTTAGGGTTAATGGGATGCATGCATTTGAGTACCCAAGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGATAAGCCACACAACCATAGTGATGAAGAGGGTTCTTGAGTCCTATGAAGGTTTTAACAACATTAACACTCTAATTGATGTTGGTGGTGGTCTTGGTATCAATCTCAAAATGATCACTTCCAAATATCCAAATATCAATGCTATTAACTTTGACTTGCCTCATGTAATTCAACATGCCCTCACCTATCCCGGTGTGAAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTAACGGAGATGCCATTTTCATGAAGTGCATACTTCATGATTGGAGTGATGAACATTGCTTGAAGGTGTTGAAGAATTGCCATAAAGCCATTCCTGAAGATGGAAAAGTGATTGTTGTAGACATAATGGTTCCGGTTTTGCCGGGGAATACAACCGCCGCTAAGGTTGCTTTCAAAGCTGACTTATTGATGATGACTCAAAACATTGGAGGAAAAGAGAGAACCAAACGTGACTTCATTCATTTGGCCACTCTTTCTGGATTTTCTTCCATCAAATTTGTGTGCTCTGTCTCTGGATATTGGGTTATGGAGTTCTACAAGTAG 1014 0.3925 MAPSLESNKNVVIDDESNKNLLKEEEEDGMLFAMDLGILVAFPMAVKTAFELGIFDIMAKDENDQEHELIASPQKIVYSLTAAASKYFVTDDDGVNFGHTLSLILDKVFLESWSVELKGAILEGGVPFVRVNGMHAFEYPSVDPRFNDVFNKAMISHTTIVMKRVLESYEGFNNINTLIDVGGGLGINLKMITSKYPNINAINFDLPHVIQHALTYPGVKHVGGDMFESVPNGDAIFMKCILHDWSDEHCLKVLKNCHKAIPEDGKVIVVDIMVPVLPGNTTAAKVAFKADLLMMTQNIGGKERTKRDFIHLATLSGFSSIKFVCSVSGYWVMEFYK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00451 337 SUPERFAMILY "Winged helix" DNA-binding domain 24 68 IPR036390 -
Aip02g00451 337 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 337 IPR016461 GO:0008168
Aip02g00451 337 Gene3D Vaccinia Virus protein VP39 89 337 IPR029063 -
Aip02g00451 337 Gene3D - 10 88 IPR036388 -
Aip02g00451 337 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 64 - -
Aip02g00451 337 PIRSF O-mtase 12 71 IPR016461 GO:0008168
Aip02g00451 337 PIRSF O-mtase 63 337 IPR016461 GO:0008168
Aip02g00451 337 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 336 IPR029063 -
Aip02g00451 337 Pfam O-methyltransferase domain 116 319 IPR001077 GO:0008171
Aip02g00451 337 PANTHER O-METHYLTRANSFERASE 75 337 IPR016461 GO:0008168
Aip02g00451 337 PANTHER O-METHYLTRANSFERASE 1 64 IPR016461 GO:0008168
Aip02g00451 337 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 75 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00451 Aip-Chr2 6326015 6357678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00451 26 337 Monolignol Biosynthesis Gene Families AT5G54160 45.821 8.29e-106 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00451 K13066 - aip:107624476 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00451 02 6326015 6357678 Aip02g00451 02 6326015 6357678 ECH