Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00444 ATGGAAGCACATAGCTCTAAGGATGCACAAGTCATTCAAATAAGTGAAGATCATGATGAAACAAGGAATCCAGGAGGGAGTAAGATCTGTAGTGAAGCGCCATGTGGTTTTGCAGATGCAGGATCCATCTCTAAAGATTCTGAGGAACGATCAACTTCCATGCGAAAGCTTTTGATAGCAGTGGGCCTTTGTTTTGTTTTCATGACTGTTGAAGTAATTGGAGGGATCAAAGCCAACAGTCTTGCAATATTAACTGATGCGGCACATTTGCTTTCAGATGTTGCAGCCTTTGCCATCTCCTTATTTTCGTTATGGGCTGCTGGATGGGAAGCTACCCCCCGCCAATCGTATGGATTTTTTAGAATAGAGATTCTTGGAGCTTTGGTTTCCATCCAAATGATATGGTTGCTTGCTGGAATTCTGGTATACGAAGCAATCGACAGAATGGTAGCTGGTCCTCGTGAGGTGGATGGCTTTCTAATGTTTTTAGTTTCTGCATTTGGTCTAGTGGTCAACATCATCATGGCTGTGCTATTGGGCCACGATCATGGACATGGACATGGGCATGGGCATGGGCATGGCCACGGCCACGAACACGGACACGGGCATGAACACGGGCAAGAGCATGGCCATGATGATCATGGCCATGGCCATGGATTCACCTTGTCTACACATGATCATCATCCTCATCATCATCATCATACAAGTGACGTGCACCATCTTGCTCATGATGATCACACACACCATGGTGATGAAAACTCTCCAAAAGAGGGACATCATGGGCATAATCATGCTCACCAGGATGTTACTAAACCACTTCTTGGTGAACCTGAACCAGAGAAGAAGAAGCGATTTAACATAAATGTACAGGGTGCTTATCTCCATGTCCTCGGGGACTCTATCCAAAGTGTTGGTGTAATGATCGGTGGAGCAATCATATGGTATAAGCCTGAGTGGCAGATAGTTGATTTGATCTGTACTCTAATCTTTTCGGTAATTGTTCTGGGGACGACTATCAATATGCTTCGAAACATATTGGAGGTACTGATGGAGAGCACACCGCGAGAGATCGATGCTACTAAGCTGGAAAGTGGGCTGCTGGAGATGGAAGAAGTAGTGGCTGTTCATGAGCTGCATATATGGGCCATAACCGTCGGTAAAATCTTGCTAGCTTGCCATGTTAAAATCAGACCCGACGCCGATGCAGACATGGTCCTAGACAAGGTTATTGACTACATCAAAAGGGTCCATAACATCAGCCATGTTACAATACAGATAGAGCGTTAG 1287 0.4522 MEAHSSKDAQVIQISEDHDETRNPGGSKICSEAPCGFADAGSISKDSEERSTSMRKLLIAVGLCFVFMTVEVIGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIDRMVAGPREVDGFLMFLVSAFGLVVNIIMAVLLGHDHGHGHGHGHGHGHGHEHGHGHEHGQEHGHDDHGHGHGFTLSTHDHHPHHHHHTSDVHHLAHDDHTHHGDENSPKEGHHGHNHAHQDVTKPLLGEPEPEKKKRFNINVQGAYLHVLGDSIQSVGVMIGGAIIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATKLESGLLEMEEVVAVHELHIWAITVGKILLACHVKIRPDADADMVLDKVIDYIKRVHNISHVTIQIER 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00444 428 MobiDBLite consensus disorder prediction 238 278 - -
Aip02g00444 428 Gene3D Cation efflux protein transmembrane domain 53 349 IPR027469 -
Aip02g00444 428 MobiDBLite consensus disorder prediction 1 25 - -
Aip02g00444 428 MobiDBLite consensus disorder prediction 197 224 - -
Aip02g00444 428 Pfam Cation efflux family 57 350 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aip02g00444 428 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 428 - -
Aip02g00444 428 TIGRFAM CDF: cation diffusion facilitator family transporter 54 428 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Aip02g00444 428 MobiDBLite consensus disorder prediction 185 278 - -
Aip02g00444 428 PANTHER METAL TOLERANCE PROTEIN A1 1 428 - -
Aip02g00444 428 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 356 427 IPR036837 -
Aip02g00444 428 SUPERFAMILY Cation efflux protein transmembrane domain-like 51 351 IPR027469 -
Aip02g00444 428 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00444 Aip-Chr2 6206462 6209996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00444 264 428 Inorganic Solute Cotransporters AT2G46800 83.529 7.67e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00444 K14689 - gmx:100794876 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00444 02 6206462 6209996 Aip02g00444 02 6206462 6209996 ECH