Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00426 ATGCCAGAAAGCATGAGTATATCAGTGAATGGACAATCTCAAGTTCCACCTGGATTCAGGTTCCATCCAACTGAGGAAGAACTCCTTCAATACTACTTAAGGAAGAAGGTCTCTTATGAGAAGATTGATCTTGATGTTATTCGTGATGTTGATCTCAACAAGCTTGAACCATGGGACATACAAGAGAAATGTAAGATAGGAACCACCCCACAAAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTACCCGACCGGAACCCGGACGAATAGAGCGACCGCGGCCGGGTTCTGGAAGGCCACCGGCCGTGACAAGGTGATATATAGCAACGGGAAGAGGATTGGAATGAGGAAGACGTTGGTATTCTACAAAGGAAGAGCCCCTCATGGCCAAAAATCTGATTGGATCATGCATGAGTATAGGCTTGATGATAACACCACCAACGATGCCAATATTGTTTCAAATGTGATGGGAGATGCAGCACAAGAAGAAGGGTGGGTGGTGTGTAGAATATTCAAGAAGAAGAACCATCTAAAAACCCTAGATAGTCCTTTAACCTCTTCCATCTCTGGCGACGGAGGTAGGAGGAGCCACCACCACCACCACCTATTCGACTCGTGCGACGAGGGCGCCTTAGAGCAAATTCTCCAACAAATGGGAAGAGGTGGTGGTGGTGGTTGCAAGGAAGAGATCAACAACTATGATCAATCTAACAACAACAACAACAATAATAACAACAACTATGGTGGATCATCATCGTTAACAACAAGGTATGCAAGACCTTTTGACACAATCAACAACAATGTTGATAGCAGGTTCTTGAAGCTCCCAAGCCTAGAGAGTCCAAAATCAACAAGCATGGATCATAACAATAATAACAACAATGATAATGATGATAGCAATGAAAATAATGGGTACCATCCTATTATTCCAGTTGAGATGGTAACTGAAAACGAAGGGTCATTCACATGTGACAATCCCAACAACATGTTTCATCATCACCATTTGGGTGGTGGCGGTGGCGGCGGCAGCGACGGCGGTGGCGGTCTTACAAATTGGGTAGCGCTAGATAGGCTTGTTGCTTCTCAGCTTAACGGTCAGACCGAAGCTTCTAGACAACTCTCTTGCTTCAATGACCCCACCATGGGGTATGGCACTGGAAATCATGATCTTCTATTTCCAACCGTCAGATCTACTTCATCGTTGACGTCATCGTCAGCGTCAATAAATCCAAGGGCTGTTATTAGTGCGGGTGCAGGTGCATACATTTCTCCAGGCGCACAGGATTATACCACCACAAGCGAGATTGACCTGTGGAACTTTGCTAGATCCACTTCTTCGTTATTGTCATCCTCTGAGCCATTGTGCCACGTGTCCAACACAGGTGGTTGCTCTTCCACACCTGAGGTTGAGGTTGAAGAATCTACCGTCAAGACTTCCAATCCTTTTATCCTCTGGCAGGCACGTGCTGGTATACAAGAAGTGCATTTTCTTCCTTTCAATCCAACTGATAAGAGGACTACATTGACCTATATTGATCAAGATGGTAAAATGTATAGAGTAAGCAAAGGTGCACCCGAACAGATCCTACACTTTGCCCACAACAAATCAGACATCAAACGCAGAGTTCATGCAGTGATTGATAAGTTTGCAAAGCGCGGTCTGCGATCTCTTGCTGTAGCATACCAGGAAGTTTCCGATGGAAGGAAAGAAAGTGCTGGAGGCCCATGGCAGTTTATTGGCCTTATTCCCCTCTTTGACCCACCTAGGCATGATAGTGCCGAAACAATACGGAGGGCACTAAATCTCAGAGACAAGGATGAATTCATTGCTGACTTGCCTATTGATGAACTAATCGAAAAAGCAGATGGATTTGTTGGTGTATTTCCTGAACACAAGTATGAGATTGTGAAGCGTTTGCAAGTGAGGAAACATATATGTGGAATGACTGGTGATGGAGTGAATGATGCACCTGCTCTAAAGAAGGCAGACATTGGTATAGCTGTCGCCAATGCCACGGATGCTGCTCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGTCTTAGTGTTATCATAAGTGCTTGCTAG 2094 0.4484 MPESMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDANIVSNVMGDAAQEEGWVVCRIFKKKNHLKTLDSPLTSSISGDGGRRSHHHHHLFDSCDEGALEQILQQMGRGGGGGCKEEINNYDQSNNNNNNNNNNYGGSSSLTTRYARPFDTINNNVDSRFLKLPSLESPKSTSMDHNNNNNNDNDDSNENNGYHPIIPVEMVTENEGSFTCDNPNNMFHHHHLGGGGGGGSDGGGGLTNWVALDRLVASQLNGQTEASRQLSCFNDPTMGYGTGNHDLLFPTVRSTSSLTSSSASINPRAVISAGAGAYISPGAQDYTTTSEIDLWNFARSTSSLLSSSEPLCHVSNTGGCSSTPEVEVEESTVKTSNPFILWQARAGIQEVHFLPFNPTDKRTTLTYIDQDGKMYRVSKGAPEQILHFAHNKSDIKRRVHAVIDKFAKRGLRSLAVAYQEVSDGRKESAGGPWQFIGLIPLFDPPRHDSAETIRRALNLRDKDEFIADLPIDELIEKADGFVGVFPEHKYEIVKRLQVRKHICGMTGDGVNDAPALKKADIGIAVANATDAARSASDIVLTEPGLSVIISAC 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00426 697 SUPERFAMILY NAC domain 10 175 IPR036093 GO:0003677|GO:0006355
Aip02g00426 697 MobiDBLite consensus disorder prediction 280 305 - -
Aip02g00426 697 Pfam haloacid dehalogenase-like hydrolase 593 665 - -
Aip02g00426 697 SUPERFAMILY HAD-like 512 696 IPR036412 -
Aip02g00426 697 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 392 - -
Aip02g00426 697 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 9 392 - -
Aip02g00426 697 MobiDBLite consensus disorder prediction 221 256 - -
Aip02g00426 697 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Aip02g00426 697 MobiDBLite consensus disorder prediction 232 256 - -
Aip02g00426 697 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Aip02g00426 697 Gene3D - 488 587 IPR023299 GO:0000166
Aip02g00426 697 MobiDBLite consensus disorder prediction 280 308 - -
Aip02g00426 697 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Aip02g00426 697 Gene3D - 606 688 IPR023214 -
Aip02g00426 697 Gene3D - 588 603 IPR023214 -
Aip02g00426 697 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 494 695 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00426 Aip-Chr2 5923792 5937223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00426 1 464 NAC Transcription Factor Family AT2G46770 51.489 8.76e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip02g00426 NAM 9.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00426 - - ahf:112734309 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00426 02 5923792 5937223 Aip02g00426 02 5923792 5937223 ECH