Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00418 ATGATCTCCAAGAAGAAGGGTAGAGGAACGGAAACAACAAAAATTACAAAGACAACGACAGCGACAGCAACAACGAAGTCTCGCACCCGTGTTGGCAAGTATGAACTTGGAAGGACTATTGGCGAGGGAAGCTTTGCGAAGGTCAAAATTGCAAGAAACGTTGATAATGGCCAAAGTGCTGCCATTAAGATCCTCGTCAAAAATCAGATTGTGAAACACCCTAGGATGATGGAACAGAAGGAAATCTCTACGATGAAGATGGTCCAACATCCAAACGTGATCAAAATTTATGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTCTTAGAGTTGATCAAGGGAGGAGAACTATTTGACAAAATTGCCAGAAAAGGGAGACTAGAAGAAAATGAAGCAAGAAGCTATTTTCATCAATTAATCAATGCAGTTGATTATTGCCACAGTAGAGGAGTTTATCATAGAGATTTGAAGCCTGAAAATCTTCTTCTGGACAAAAAAGATATTCTTAAAGTTTCAGATTTCGGATTGAGCACATTCGTACAGCGAGAGGATAAACTTCTGCACACTACCTGCGGAACCCCTAATTATGTTGCACCTGAGGTGATCCATAATGGAGGTTATGATGGTTCTGCATCTGATATATGGTCTTGTGGAGTCATTCTCTTTGTACTCATGGCTGGATACTTGCCTTTTGATGAACCAAATCAAATTGCACTTTTCAGAAAAATTGAAAAGGCTGAATATGTTTTTCCACCGTGGTTTTCGAAGGAGGCAAAGAAACTACTAACTCGCATTCTTGATCCAAATCCTCTCACAAGGATAAAAATTTCAGAGATATTACAAGATGAATGGTTTAGAAAAGGATACAAGCCACCAATATTTAAAGAGGAAGAAGATATAAATACAGACGATGTGACTGCTGCTTTTGATGATTCTAGGGAAAATCTGGTGACAGAAACAAAAGAGAAACCGGCCTCACTGAATGCTTTTGAGCTCATTTCAAGATCAAAGAACTTTAACCTTGAAAGTATGTTTGAGGAGAAATCACTAGGAATGGTGAAGAGAGAAACACATTTTACCTCACAGTGCCCTCCAAATGAAATTATGTCTAAAATTGAGGAAGCTGCCAAGCCTCTTGGATTCAATGTTCACAAGCACAATTATAAGATGAAGTTGCAAGGTGATAAGAGTGGAAGGAAGGGGCACCTTTCAGTGGCTACTGAGGTTTTCGAGGTAGCACCCTCCTTGCACGTGGTGGAATTGCGAAAAACAGGGGGAGATACGTTGGAGTTTCACAAGGCATGTTTCTACAAAAGCTTTTCATCAGGGTTGCAAGACATAGTGTGGCATTCTGAAGAGAACAAAATTGACGAAGAATGA 1383 0.3977 MISKKKGRGTETTKITKTTTATATTKSRTRVGKYELGRTIGEGSFAKVKIARNVDNGQSAAIKILVKNQIVKHPRMMEQKEISTMKMVQHPNVIKIYEVMASKTKIYIVLELIKGGELFDKIARKGRLEENEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDKKDILKVSDFGLSTFVQREDKLLHTTCGTPNYVAPEVIHNGGYDGSASDIWSCGVILFVLMAGYLPFDEPNQIALFRKIEKAEYVFPPWFSKEAKKLLTRILDPNPLTRIKISEILQDEWFRKGYKPPIFKEEEDINTDDVTAAFDDSRENLVTETKEKPASLNAFELISRSKNFNLESMFEEKSLGMVKRETHFTSQCPPNEIMSKIEEAAKPLGFNVHKHNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHVVELRKTGGDTLEFHKACFYKSFSSGLQDIVWHSEENKIDEE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00418 460 PANTHER - 24 452 - -
Aip02g00418 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Aip02g00418 460 Pfam Protein kinase domain 34 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00418 460 Pfam NAF domain 325 386 IPR004041 GO:0007165
Aip02g00418 460 Gene3D Transferase(Phosphotransferase) domain 1 113 314 - -
Aip02g00418 460 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Aip02g00418 460 SUPERFAMILY Protein kinase-like (PK-like) 31 315 IPR011009 -
Aip02g00418 460 Gene3D Phosphorylase Kinase; domain 1 22 112 - -
Aip02g00418 460 ProSiteProfiles NAF domain profile. 323 347 IPR018451 GO:0007165
Aip02g00418 460 Gene3D Kinase associated domain 1, KA1 322 451 - -
Aip02g00418 460 SMART serkin_6 34 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00418 460 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 24 452 - -
Aip02g00418 460 MobiDBLite consensus disorder prediction 1 24 - -
Aip02g00418 460 CDD CIPK_C 329 445 - -
Aip02g00418 460 ProSiteProfiles Protein kinase domain profile. 34 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00418 Aip-Chr2 5780293 5791787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00418 23 453 CBL-interacting serine-threonine protein kinases AT1G01140 70.320 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip02g00418 Pkinase 2.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00418 - - lja:Lj3g3v2483040.1 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00418 02 5780293 5791787 Aip02g00418 02 5780293 5791787 ECH