Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00397 ATGGGGCAGTGCTACGGCAAGACTAATCCCTCGCCGGAAACTGACGCCGCCGCGATTCCCAGCTCCGACGACCTTCCTCCGCCGTCAGTCACGCCCTCGGTGAAGAACACTCCGGCGAGAGCTTTATTGTCGCCGTGGCGGAGCCCTTACCCTCACGGAGGTGGCGTGACACCGTCTCCGGCTAGGACAGCGACTCCGAGGAGGATTTTCCGGCGGCCTTTTCCACCTCCGTCTCCGGCAAAGCATATTCGTGCGTCGTTGGCGAAGCGACTGGGGCGAGGCGCGGTGGCGGCGAGGGCGAAGGAGGGGACTATACCGGAGGAGGGAGTGGCAGCGGCGACGGCGGAGGAAGAGGAGGAGGAGCTGGATAAGAGGTTTGGATATGGAAAGAATTTTGGTGCAAAGTATGAGATTGGGAAGGAAATTGGGAAAGGGCATTTTGGTCATACTTGTTATGCAAGGTGTAAGAAAGGTGAATTCAAGGACCAAGCTGTAGCAGTTAAAATCATTTCCAAGTCTAAGATGACGACGGCGATAGCAATAGAAGATGTTCGGAGAGAGGTGAAGATCTTAAAAGCTCTATCTGGCCATAAGCATCTCATCAAATTTCATGATGCTTTTGAGGATGCCAACAATGTGTACATAGTAATGGAATTGTGTGAAGGCGGGGAGCTTCTTGACAGGATTTTGTCAAGGGGAGGGAAGTATCCGGAAGAGGATGCCAAAGCTATAGTTTTGCAGATTCTAAGCGTAGTTGCTTTTTGTCATCTTCAGGGCGTCGTGCACCGTGACCTAAAACCGGAGAATTTCCTCTTTACTTCAAAAAGTGAAGATGCTGATATGAAGCTTATTGATTTCGGTTTATCGGATTTCATCCGGACAGACGAACGACTAAATGACATTGTTGGGAGTGCATATTATGTTGCACCAGAGGTACTTCACAGGTCATATAGTGTGGAAGCAGATATATGGAGTATCGGTGTGATTACATATATCTTGTTATGTGGAAGTCGACCATTCTGGGCACGAACAGAATCTGGAATTTTCCGTTCAGTGCTCAGAGCTGATCCTAACTTTGAAGATTTACCTTGGCCTTCTGTGTCTGCGGAGGCCAAGGACTTTGTAAAGAGGCTCCTAAACAAGGACTATAGGAAAAGAATGACAGCCGTCCAAGCTCTAACTCACCCTTGGTTGAGGGATGAAAACCGCGCCATCCCTCTCGATATATTAGTTTATAAACTAGTGAAGTCCTATATACACGCAACACCATTCAGACGTGCAGCATTAAAGGCTCTTTCAAAGGCTTTGACAGAAGACGAATTTCCCTATCTTAGAGCGCAGTTCAAATTGTTGGAACCAAATCGAGACGGCCACGTATTACTCGACAATTTCAAAATGGTTATCTCTACTGTTTCACTCCTTAAATTCTCAAGTTTATCTTCTTCTGCTTGTATGTGTATGTCAATGCTTAGCTACTTTTTAGTCTCTATGATTCAGTTTCATAGCAAACTTTGCAGGCCCTTATACGCCATGCAACCGATGCCATGA 1548 0.4735 MGQCYGKTNPSPETDAAAIPSSDDLPPPSVTPSVKNTPARALLSPWRSPYPHGGGVTPSPARTATPRRIFRRPFPPPSPAKHIRASLAKRLGRGAVAARAKEGTIPEEGVAAATAEEEEEELDKRFGYGKNFGAKYEIGKEIGKGHFGHTCYARCKKGEFKDQAVAVKIISKSKMTTAIAIEDVRREVKILKALSGHKHLIKFHDAFEDANNVYIVMELCEGGELLDRILSRGGKYPEEDAKAIVLQILSVVAFCHLQGVVHRDLKPENFLFTSKSEDADMKLIDFGLSDFIRTDERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFEDLPWPSVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDENRAIPLDILVYKLVKSYIHATPFRRAALKALSKALTEDEFPYLRAQFKLLEPNRDGHVLLDNFKMVISTVSLLKFSSLSSSACMCMSMLSYFLVSMIQFHSKLCRPLYAMQPMP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00397 515 CDD STKc_CAMK 135 397 - -
Aip02g00397 515 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Aip02g00397 515 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 468 - -
Aip02g00397 515 SMART serkin_6 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00397 515 SUPERFAMILY Protein kinase-like (PK-like) 135 424 IPR011009 -
Aip02g00397 515 ProSiteProfiles Protein kinase domain profile. 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00397 515 PANTHER CDPK-RELATED KINASE 3 44 468 - -
Aip02g00397 515 MobiDBLite consensus disorder prediction 1 81 - -
Aip02g00397 515 Pfam Protein kinase domain 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00397 515 MobiDBLite consensus disorder prediction 1 16 - -
Aip02g00397 515 Gene3D Phosphorylase Kinase; domain 1 129 225 - -
Aip02g00397 515 Gene3D Transferase(Phosphotransferase) domain 1 226 419 - -
Aip02g00397 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00397 Aip-Chr2 5432052 5437691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00397 33 468 EF-hand Containing Proteins AT3G50530 60.084 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip02g00397 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00397 - - gmx:100796256 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00397 02 5432052 5437691 Aip02g00397 02 5432052 5437691 ECH