Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00379 ATGGTTCAACCAAGATTGAAATCCAAAACTCTCACTAGTGGTTTAGCAACACTCTTCTTGTTCTTCTTGTTGTTGTGGCGGTGCGTGCTGTCGGATAACGAGTTAGTGGATTATGAAGCTGCTTATCTGGAGAAGCTTAGGAAGGCTATATCCCCTGCTCCCTCCAACTGGTTCACCGCCACCAACATGTGCGACTGGAGCCGTGTGATTTGCACCGACGGTGTCGACGGCCGCACCGTAGTTGACATCAACCTCAGCTCGATGTCTCTTAACGGAACGCTCCCTTCCGGTCTCAACAACTCCTTACACAACCTCAAAACTCTCAATCTCGGTCACAATTCTCTCACCGGCCCTCTCCCCTCCTTTGCTGGCCTCTCTCTCCTCCAAGAGCTACATCTGGAATCCAACAACTTCACCTCCGTCCCTCATGGCTGCTTCCAAGGTCTAAAAAGTTTGCAGCAGTTCTCCTTCACTTCCAACACCAACCTCGAACCGTGGACATTTCCCGTCGATTTGGCTGACTCCATTGAGCTCCGAATTCTCGATCTCGGCGCTACAAACCTCACTGGCTCCTTGCCAGATACATTTGATTCCTTCCCCGATTTGCAGATTCTTGAACTCTTTGATAACAACCTCACTGGCTTGTTGCCCAAGTCTCTTGCGAAACTACTCAAGCTACGATCGTTATATCTCAACGACCAAAAGTTGTCGGGTAAAATTGAATTCCTTTCATCCATGACCCAGTTGAAATATGTGTGGCTTCACGGGAACGCCTTTGAGGGTCCCATTCCTGACTTGTCAAACTGCACCAACTTGGCAGAACTTTATCTTGACAACAATCAATTAACGGGTGCAGTTCCACCTTCTCTCATCAATCTCTCGTATTTGGAGGAGGTTTTCTTGGCCAACAACTCGCTGCAGGGCCCTATGCCTGCGTTCAACAAGAATGTGAAAACAATAATTCTTGAAGGAAATGGGTTCTGTTTAAACCATCCTGGCCCTTGTGATTACAGAGTCACCACTTTGCTACAAGTTGCTGAGGCCTTTGGATATCCGTTTCAGTTGGCGCGCACGTGGCGAGGGAACGATCCCTGTAACCGTTGGAGTTTCATCACGTGCGATATCCAAGGCAAGATCAGAACCGTCAATTTGACGAACCTGAATCTCACCGGAACCATCTCGCCTGCCTTTGGCAATTTAAGCGATTTGCGAGAACTGCATCTTAGTGGGAACAATTTAAGCGGATCAATACCTGAAAGTTTGACAACTCTGTCACAACTCAAGATTCTGGATGTCTCCAACAACAACTTATCCGGGATCATTCCCACATTCTCTTCTAGCATCACGCTCAATACTACAAATAATCATGGTTTTGTTGATAGAAATTCTCCACCCAAAGCAAGTCCTCCTCATCCATCTGCACTTCCTCCCAGTCCTACTAATAGAGCAAGGCCAACCGCATCTAGAACCACACCTCTTTGGATTAAATTAGGTGCTGGTGCTGCAGGTAGTGTTGTTGGAATTATTGTAATCTTTGGAGTGATTGTTTTTAACCGTAAGAGGCGTTTAGGTTTAGTACAAAAGATAGTGTTAAGGAGAAAAAGAAAGCACGTTGATCATTATGTTGAAAATCTCATCAAAAGTTACAGTTCTCTGAGTCTTAAGCGATATTCTTATAAAGAAGTGAAAAAAATGACAAAGTTGTTTAGTGAAAAATTAGGAGAAGGAGGATATGGCATTGTGTATAAAGCAAGTTTAGCTGATGGTCAACAGGTGGCAGTAAAAATACTGAAAGAGTCAAAGGGAAGTGTGGAAGAATTTATAGATGAAGTTTTTATCATTAGCAGAACATCTCATATGAACATTGTTTCACTTTTGGGATTTTGTTATGAGAAGAATAAACGAGCATTGGTTTATGAATTCATGCACAATGACTCTTTAGATAAGTTTACTTATAAAAAAGAGTCTTCTAATGGTGTTTATAATTTGGATTGGAACACCTGGTACCAAATCTCAATTGGCATTGCTCGAGGGTTAGAATATTTGCATCAAGGATGTAATACAAAAATTTTACATCTTGATATTAAACCTCAAAATATCCTTTTAGATGAACATTTTTGCCCCAAGATTGCAGATTTTGGATTGGCTAAAATATGTAAGAAAGATCAAAGTATTGTATCTATATTAGGTACAAGAGGAACTCCAGGATACATTGCACCAGAAGTTTTTAGTCGAACATATGGTGGTGTTTCTCACAAATCTGATGTATATAGTTATGGTATGTTGATTCTTGAAATTATTGGAGGAAGACATAACTACTATGAAAGTAAAGAATCACATACCAATGAACTTTGCTTTCCAGATTGGATCTACAAAGATCTTGAGAAAGGAAATATTCCTACAAGGTGTTTGCTTGACAAAGAAGAAGAAAATGGCATGGTAATGAAAATGACTTTAGTAAGCTTATGGTGTATTCAACCAAATCCATTGGATAGGCCTTCTATGGGTAAAGTAATAGACATGTTAGAAGGATCACTTGAGTCAATACCATATCCTCCAAAACCAGTCTTATTTTCTCCTGAAAGACTTGTCTCACAATATTCAGATATATCTTATAGCAATGAACATGAGACAAGTTCAACAACAATAGAAGAAATTGACTTAGAGAAAGGGTTAATGTGA 2682 0.4105 MVQPRLKSKTLTSGLATLFLFFLLLWRCVLSDNELVDYEAAYLEKLRKAISPAPSNWFTATNMCDWSRVICTDGVDGRTVVDINLSSMSLNGTLPSGLNNSLHNLKTLNLGHNSLTGPLPSFAGLSLLQELHLESNNFTSVPHGCFQGLKSLQQFSFTSNTNLEPWTFPVDLADSIELRILDLGATNLTGSLPDTFDSFPDLQILELFDNNLTGLLPKSLAKLLKLRSLYLNDQKLSGKIEFLSSMTQLKYVWLHGNAFEGPIPDLSNCTNLAELYLDNNQLTGAVPPSLINLSYLEEVFLANNSLQGPMPAFNKNVKTIILEGNGFCLNHPGPCDYRVTTLLQVAEAFGYPFQLARTWRGNDPCNRWSFITCDIQGKIRTVNLTNLNLTGTISPAFGNLSDLRELHLSGNNLSGSIPESLTTLSQLKILDVSNNNLSGIIPTFSSSITLNTTNNHGFVDRNSPPKASPPHPSALPPSPTNRARPTASRTTPLWIKLGAGAAGSVVGIIVIFGVIVFNRKRRLGLVQKIVLRRKRKHVDHYVENLIKSYSSLSLKRYSYKEVKKMTKLFSEKLGEGGYGIVYKASLADGQQVAVKILKESKGSVEEFIDEVFIISRTSHMNIVSLLGFCYEKNKRALVYEFMHNDSLDKFTYKKESSNGVYNLDWNTWYQISIGIARGLEYLHQGCNTKILHLDIKPQNILLDEHFCPKIADFGLAKICKKDQSIVSILGTRGTPGYIAPEVFSRTYGGVSHKSDVYSYGMLILEIIGGRHNYYESKESHTNELCFPDWIYKDLEKGNIPTRCLLDKEEENGMVMKMTLVSLWCIQPNPLDRPSMGKVIDMLEGSLESIPYPPKPVLFSPERLVSQYSDISYSNEHETSSTTIEEIDLEKGLM 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00379 893 PANTHER OSJNBA0070M12.3 PROTEIN 23 844 - -
Aip02g00379 893 SUPERFAMILY L domain-like 50 328 - -
Aip02g00379 893 SUPERFAMILY Protein kinase-like (PK-like) 544 843 IPR011009 -
Aip02g00379 893 MobiDBLite consensus disorder prediction 455 487 - -
Aip02g00379 893 ProSiteProfiles Protein kinase domain profile. 567 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00379 893 ProSiteProfiles Leucine-rich repeat profile. 104 126 IPR001611 GO:0005515
Aip02g00379 893 MobiDBLite consensus disorder prediction 465 479 - -
Aip02g00379 893 ProSitePatterns Protein kinases ATP-binding region signature. 573 595 IPR017441 GO:0005524
Aip02g00379 893 Gene3D Ribonuclease Inhibitor 37 331 IPR032675 -
Aip02g00379 893 SUPERFAMILY L domain-like 340 446 - -
Aip02g00379 893 Pfam Leucine rich repeat 379 437 IPR001611 GO:0005515
Aip02g00379 893 Pfam Leucine rich repeat 177 234 IPR001611 GO:0005515
Aip02g00379 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Aip02g00379 893 SMART LRR_typ_2 424 446 IPR003591 -
Aip02g00379 893 SMART LRR_typ_2 269 293 IPR003591 -
Aip02g00379 893 SMART LRR_typ_2 125 148 IPR003591 -
Aip02g00379 893 SMART LRR_typ_2 102 124 IPR003591 -
Aip02g00379 893 SMART LRR_typ_2 400 423 IPR003591 -
Aip02g00379 893 SMART LRR_typ_2 199 222 IPR003591 -
Aip02g00379 893 PANTHER RECEPTOR-LIKE KINASE TMK4 23 844 - -
Aip02g00379 893 Gene3D Phosphorylase Kinase; domain 1 541 641 - -
Aip02g00379 893 Pfam Leucine rich repeat N-terminal domain 37 71 IPR013210 -
Aip02g00379 893 Pfam Leucine rich repeat N-terminal domain 339 374 IPR013210 -
Aip02g00379 893 Pfam Leucine Rich Repeat 104 124 IPR001611 GO:0005515
Aip02g00379 893 SMART serkin_6 567 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00379 893 Pfam Protein kinase domain 570 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00379 893 Gene3D Transferase(Phosphotransferase) domain 1 642 848 - -
Aip02g00379 893 Gene3D Ribonuclease Inhibitor 337 461 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00379 Aip-Chr2 5058093 5061524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00379 554 864 Receptor kinase-like Gene Family AT5G38280 60.000 1.70e-121 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip02g00379 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00379 - - ahf:112729553 1667.9