Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00378 ATGGGTGAACCAAGATGGAAAACCAAAACTCAAACCAGTGGTTTACCAACATTCTTCTTCTTCTTCTTGTTATGGCGACGTGTGGTGTCGAATACTAACAAGGAAAACCAGATAGCGGGTGATGAAGCCGCTTATCTGAAGCAGCTTAGGAAGGCCGTATCCCCTGCCCCCTCTAGCTGGTTCAACGTCACGAACATGCGCGATTGGGGACACGTCACGTGCACCGACAGTGGCTTCGGCCTCACCGTAGAAGAAATCAACCTCATTTCAATGCCCCTTACCGGAACACTCCTTCCAGGTCTCAACAACTCCTTAGGTCTATCAAGTTTGCAGCTCTTCAACTTGGATTTCAACACCTATCTCGAACCCTGGACATTTCCCGCCAGTTTGACCGACTCCTCTAAGCTCACTACACTCTCTCTCCACACTACAAACCTCATGGGCTCCTTGCCAGATGCATTTGATTCCTTCCCCAAATTAGAGATCATTGATCTCTCTTATAACAACCTCAATGGCGTGTTTCCCAAGTCTTTTACAAAATTACTCAATCTACGATGGGAAACTCCTTCCAGGGTCTCATTCCTGACTTGTCAAATTGCACCAAACTGCAAGATATCTTCCTTGCGGACAATGTGTACCTCCACCTCCTCTCATGAATCTCTCGTCTTTGGTGGAGTCACCACTTTGCTACAGGTGGCTGCAGCATTTGACTATCCGTTACTGTTGGCGCGCTCGTGGCGAGGGAACAATCCCTGTAACCGTTGGAGGTTCATCAGCTGCGATATCCAAGGCAAGATCACAACCGTCAATTTGACAAACCTGAATCTCACTGGAACCATCTCATCCTCGTTTGCCAAGTTAAGTGATCTGCGAGACTTGCATCTTGGTGGGAATAATTTAAGTGAATCAATACCTGAAAGTTTGACCACTTTGTCACGACTGAAGATTCTGGATGTCTCCAACAACAACTTATCGGGGATCATTCCCACATTCTCGCCTAACGTTGTGCTCAATACTGCAAATAATGCTTTTCTTGTTGGGCATTCTCCAACTAATCAACCAAGTCCAACTGCATCTCGAACTAAACCTCATTGGATTAAACTAGGTGCTGCTGCCATAGGTAGCGTTGTTGGAGTTGTTGCAATATTTGGGAATAAAAGAGCATTGGTCTATGAATTCATGCATAATGACTCTTTGAATAAGTTCACTTATAGAAAAGAACCTTCTGATACTAATTGTAATATGGATTGGAATACCTTGTATCAAATCTCAATTGGAATTGTTCGAGGTCTAGAATATCTACACCACGGATGTAATACAAGAATCTTGCATCTTCATATTAAACTTCAAAATATTCTTCTGGATGAATGTTTTCCCCCAAAGATTGCAGATTTTGGATTGGCTAAAATATGTAAGAAGGATCAAAGTATAGTATCTATAATAGGTACCGGAGGAACTCCAGGGTATATTGCACCAAAAGTATTTAGCCGAACATATGGCGGAGTTTCTCACAAGTCTGATGTATATAGTTATGGTATGCTGATCCTTGAAATTATTGGAGGGAGACAGAACTACTATGAGAATGTACAATCACATGCCAGTGAAATTTGCTTTCCAGATTGGATTTATAAAGATCTTGAGCAAGGTAACATTCCTGCAAACTGTTTGCTCCACAAAGAAGAAGAAAATGGCATTGCAATGAAAATGACTTTGGTGAGCTTATGGTGTATTCAACCAAATCCATTAAATAGGCCATCTATCAGTAAAGTAATAGAGATGCTAGAAGGACTGCTGGAATCAATACCATATCCGCCAAAACCAGCCTTATTTTCTCCTGAAAGATTTATTCCACAATATTCAGATACATCATATAGTAATAGATATGAGACATGTTCAATAACAACTGAGGAAATTGTATCTGATAAAAGGTAA 1932 0.4156 MGEPRWKTKTQTSGLPTFFFFFLLWRRVVSNTNKENQIAGDEAAYLKQLRKAVSPAPSSWFNVTNMRDWGHVTCTDSGFGLTVEEINLISMPLTGTLLPGLNNSLGLSSLQLFNLDFNTYLEPWTFPASLTDSSKLTTLSLHTTNLMGSLPDAFDSFPKLEIIDLSYNNLNGVFPKSFTKLLNLRWETPSRVSFLTCQIAPNCKISSLRTMCTSTSSHESLVFGGVTTLLQVAAAFDYPLLLARSWRGNNPCNRWRFISCDIQGKITTVNLTNLNLTGTISSSFAKLSDLRDLHLGGNNLSESIPESLTTLSRLKILDVSNNNLSGIIPTFSPNVVLNTANNAFLVGHSPTNQPSPTASRTKPHWIKLGAAAIGSVVGVVAIFGNKRALVYEFMHNDSLNKFTYRKEPSDTNCNMDWNTLYQISIGIVRGLEYLHHGCNTRILHLHIKLQNILLDECFPPKIADFGLAKICKKDQSIVSIIGTGGTPGYIAPKVFSRTYGGVSHKSDVYSYGMLILEIIGGRQNYYENVQSHASEICFPDWIYKDLEQGNIPANCLLHKEEENGIAMKMTLVSLWCIQPNPLNRPSISKVIEMLEGLLESIPYPPKPALFSPERFIPQYSDTSYSNRYETCSITTEEIVSDKR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00378 643 Gene3D Ribonuclease Inhibitor 41 218 IPR032675 -
Aip02g00378 643 Pfam Leucine rich repeat 266 324 IPR001611 GO:0005515
Aip02g00378 643 Pfam Leucine rich repeat 135 186 IPR001611 GO:0005515
Aip02g00378 643 ProSiteProfiles Protein kinase domain profile. 290 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00378 643 PRINTS Leucine-rich repeat signature 160 173 - -
Aip02g00378 643 PRINTS Leucine-rich repeat signature 311 324 - -
Aip02g00378 643 PANTHER RUST RESISTANCE KINASE LR10-RELATED 385 634 IPR045874 GO:0004672
Aip02g00378 643 SUPERFAMILY Protein kinase-like (PK-like) 384 595 IPR011009 -
Aip02g00378 643 Gene3D Ribonuclease Inhibitor 225 348 IPR032675 -
Aip02g00378 643 PANTHER TYROSINE KINASE FAMILY PROTEIN 385 634 - -
Aip02g00378 643 Pfam Protein kinase domain 385 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00378 643 Gene3D Transferase(Phosphotransferase) domain 1 366 602 - -
Aip02g00378 643 SUPERFAMILY L domain-like 60 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00378 Aip-Chr2 5049618 5053712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00378 384 633 Receptor kinase-like Gene Family AT1G66910 53.333 3.86e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip02g00378 Pkinase 9.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00378 - - ahf:112729553 434.106