Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00376 ATGGGGGAAGATCTGAGGAGCAAGGTGAAATCAGATCTGGAATTGTTCCTCCGAGGGAAAAAGTATTACCGGAAGCTCGGCCGAGCTTGGAGGCGGAGCTTCTTGCTGTACGGTCCCTCCGGCACCGGAAAATCGAGCTTCGTCGCTGCTATGGCGAATTTCCTTGGATACGACGTTTACGACGTCGATCTCGAGAATGTTCGCGGTGGCGATTCAGATCTGAAGCTCCTCCTCCTGGAGACGACGCCGAAATCGATCGTCGTCGTGGAAGATCTCGACAAGTTTGTTGTCGCCGCGACGACGGAATCATCGTTGCCGGCGGCGAGCGCCACGGGGATACAGATGCTGAATATAATGGACGGGATTCTTAGCGCGTGTTGTGGAGAAGAGCGCGTGATGGTGTTCACGATGAACAGTAAGGATGGAGTCGACCCGGATCTGCTTCGTCCGGGTCGGGTCGACGTTCACATTCATTTTCCCACGTGCGATTTCTCATCGTTCAAGGAACTCGCGAGTAGCCACTTGGGTGTCAAGGAGCACAAGCTGTTCCCGCGCGTGGAGGAGATTTTGGCGCGTGGGGTGAGTCTTAGCCCGGCCGAGGTCGGCGAGTTAATGATCGCGAACCGTGGGTCACCGAGTCGGGCCATAAAATCAGTAATCGGAGCGCTAAGGCCGGATGGCGGCGATGGGATCGGACGGCGGGAAAGCGCCGATGATGACTGTGATGACGTTGACGGCGGAGATGGGTGCAATGCGGTTAAGGATTTTCGAAAATTGTATGGTTTGTTCAAATTAAGAAATGGGAAAAGATCTCGACCGTCAAATAATACATTGGTCCATGATTAG 846 0.5414 MGEDLRSKVKSDLELFLRGKKYYRKLGRAWRRSFLLYGPSGTGKSSFVAAMANFLGYDVYDVDLENVRGGDSDLKLLLLETTPKSIVVVEDLDKFVVAATTESSLPAASATGIQMLNIMDGILSACCGEERVMVFTMNSKDGVDPDLLRPGRVDVHIHFPTCDFSSFKELASSHLGVKEHKLFPRVEEILARGVSLSPAEVGELMIANRGSPSRAIKSVIGALRPDGGDGIGRRESADDDCDDVDGGDGCNAVKDFRKLYGLFKLRNGKRSRPSNNTLVHD 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00376 281 PANTHER BNAC04G00800D PROTEIN 1 238 - -
Aip02g00376 281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 214 IPR027417 -
Aip02g00376 281 CDD AAA 31 160 - -
Aip02g00376 281 Gene3D - 1 161 IPR027417 -
Aip02g00376 281 SMART AAA_5 30 163 IPR003593 -
Aip02g00376 281 PANTHER BCS1 AAA-TYPE ATPASE 1 238 - -
Aip02g00376 281 Pfam ATPase family associated with various cellular activities (AAA) 35 160 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00376 Aip-Chr2 5029810 5031015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00376 26 210 Calmodulin-binding Proteins AT3G56690 27.179 7.03e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00376 - K08900 gmx:100792584 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00376 02 5029810 5031015 Aip02g00376 02 5029810 5031015 ECH
Aip06g01272 06 19180174 19181604 Aip02g00376 02 5029810 5031015 PCT