Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00366 ATGAATGAAGTAAGCCAACACATAAAGCCACCCCACAAACCAACTAAAACATTCTTTCTTTGCACTTTAATTTGGAGAGCATTTCCAGACAAACAAAGGGTTATGGAAGGGATAGGTCCCAACAACAATTCATGCACAACAAGGCCTCATAATAATGAAGGTGGTGGTGGAAATAACAACAACAATTTAGAGAAGAAAGCAAGGCCACAAGAGCAATTGAATTGTCCAAGGTGCAATTCAACAAACACAAAGTTTTGCTACTACAACAATTATAGCCTCACACAACCAAGGTATTTTTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGGTCCCTCAGGAATGTTCCTGTTGGTGGTGGTTCAAGGAAGAACAAGATCAAGATCAATACCAATAACAACAATAATAATAACAACTCTTCGTCATCGTCGTCAACAACATCAACACCTTCATCAAATTCAAAGGTTCTTGTTCATCAAGACCTACTAAACCCTAATAATAATAGGGTTATTCAAGGACAAGATCTTAATCTTGCTTTTCCATCTATGGATCATCACAACAATTATCATCATGGTTTGTTACCATTTATTGATATGGTTAATAATAATAATAATAGTAGTAGTAATAATAATAATAATAATAGTAATGGTGATGCACCAAGTTCTCTTTCAGCTTTGGAGCTTTTAAGGTCAAGCATGGCTTCTAGGGGTTTGAGTAATCCATATTATGCTTCTTCTAATTCTTCATTGGTACCATCAAATTCATCAAGTGTAATTTACCCTACTTCTGGATTAGGGTTTCCAACCATGCAAGAAGTAGTTAACAATAATAAGCAAAATAGTGGTAACCTTGGATTTTCATCTTCTTCATCAATTATGGATCATCAAGAGAATATTGTTAATAATAGTGATGGTGGAGGAAGAGTTCTTTTCCCTTTTGGAGAGGTGATGAAGAGTGCTGAAGAAAACAACAACAAAGAACAAGGGAATAATTCATCAAGCACTGCCAATGGTGGATATTGGAATGGAATGATGGGTCAAGGGTCATGGTGA 1053 0.3609 MNEVSQHIKPPHKPTKTFFLCTLIWRAFPDKQRVMEGIGPNNNSCTTRPHNNEGGGGNNNNNLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKIKINTNNNNNNNNSSSSSSTTSTPSSNSKVLVHQDLLNPNNNRVIQGQDLNLAFPSMDHHNNYHHGLLPFIDMVNNNNNSSSNNNNNNSNGDAPSSLSALELLRSSMASRGLSNPYYASSNSSLVPSNSSSVIYPTSGLGFPTMQEVVNNNKQNSGNLGFSSSSSIMDHQENIVNNSDGGGRVLFPFGEVMKSAEENNNKEQGNNSSSTANGGYWNGMMGQGSW 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00366 350 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 50 346 - -
Aip02g00366 350 MobiDBLite consensus disorder prediction 322 342 - -
Aip02g00366 350 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 50 346 IPR045174 GO:0003700|GO:0006355
Aip02g00366 350 MobiDBLite consensus disorder prediction 125 154 - -
Aip02g00366 350 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Aip02g00366 350 MobiDBLite consensus disorder prediction 40 74 - -
Aip02g00366 350 MobiDBLite consensus disorder prediction 323 342 - -
Aip02g00366 350 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Aip02g00366 350 MobiDBLite consensus disorder prediction 114 154 - -
Aip02g00366 350 Pfam Dof domain, zinc finger 71 126 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00366 Aip-Chr2 4929395 4931169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00366 65 350 C2C2-Dof Transcription Factor Family AT3G61850 44.013 1.30e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aip02g00366 zf-Dof 8.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00366 - - aip:107623806 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00366 02 4929395 4931169 Aip07g02745 07 112393968 112395421 ECH
Aip02g00366 02 4929395 4931169 Aip02g00366 02 4929395 4931169 ECH
Aip06g01257 06 18941590 18943615 Aip02g00366 02 4929395 4931169 PCT