Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00349 ATGGAGCTACAAACAACGGCCACCACCACCGCCACCACTTCAACCGTAACCGCCGCCACAAAATCCACCATAAACCGCGTAGGAGGAACGCGCCACCCTGTCTACCGCGGCGTCAGGAAGCGTCGATGGGGAAAATGGGTTTCGGAGATTCGAGAACCTCGCAAGAAGTCTCGCATATGGCTCGGTTCCTTCCCGTCGCCGGAGATGGCGGCGAAAGCCTACGACGTCGCCGCTNNNNNNNNNNNATATTAA 252 0.5556 MELQTTATTTATTSTVTAATKSTINRVGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPSPEMAAKAYDVAAXXXXY 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00349 83 Pfam AP2 domain 33 78 IPR001471 GO:0003700|GO:0006355
Aip02g00349 83 Gene3D AP2/ERF domain 34 82 IPR036955 GO:0003700|GO:0006355
Aip02g00349 83 SUPERFAMILY DNA-binding domain 34 79 IPR016177 GO:0003677
Aip02g00349 83 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF023 8 79 - -
Aip02g00349 83 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 79 - -
Aip02g00349 83 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Aip02g00349 83 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Aip02g00349 83 SMART rav1_2 34 82 IPR001471 GO:0003700|GO:0006355
Aip02g00349 83 ProSiteProfiles AP2/ERF domain profile. 34 83 IPR001471 GO:0003700|GO:0006355
Aip02g00349 83 CDD AP2 35 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00349 Aip-Chr2 4666351 4666602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00349 8 78 AP2-EREBP Transcription Factor Family AT1G01250 66.250 4.79e-31 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aip02g00349 AP2 8.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00349 K09286 - aip:107626668 127.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00349 02 4666351 4666602 Aip02g00349 02 4666351 4666602 ECH