Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00327 ATGTCCCTGAAGAAAGGCAAAAATGACGACAGGAGGAGTGCTCAGCTCAAAGGAAAAGTGAAGCCGAGTAGCCCCTCAGCAAGCTGGCGTAAGAGGCTTCGAGGCCGTCTTCATCCGTCATCGTTTGTGTTGTTTGTGTATGTAGTTAAAGTGACGGTGGCCTTCGACTTGTGGATCGGTGATAACGGCGGAGGTTGGAATGTAAGTAAATGGCTATCGCAACGGAGGCGTTGTTTATCTCACCCGCCCGATCGCACGAGTTCTCACCATAGATCGCGGGTCGTGTTAATTAAAGGCGGTGGAGATCGCACAATTTTGTTCGTCGACGCGTGGGTCCGATCGCCCTGTGGAAGTGGAGGCTGTGAGGATGTTGGAAGCATGTTGGATAGTAGATGTGGTGGTAAAGTAAGGGTTTTTGATATAATAATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGTGGACAACTGGATGGAGGGCAATGCTGGTGTGTCGAATCCACAGAATGCATTCCACATAATGGCAGCTGGTAGCATAATGTTTGTCTTCTTATTTCAGGACACAATGTATGATACCAGAGTGGAGGAAGATGCTGAGTCATCCGATTGGGAAGGTAGGGGGGCTTCAATGTTGCCCGTTTTTTTGGGTTTGGATGGGTTGCGAGCTGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCTAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGCTGTAACCCGATGTGGATGTTTGGCGGAGATGAGGATAAAGAGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGAGAGATTGGGATTAGCATACCTAAGATTTATGAGTCCTTCGCAGCACAACTAGGGGGTTTTAACCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTGTTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGCTACAAGTTGGGATCAGGGCAACACCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGCGATATTCGGCGATGTGCTAGCATTCGACGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTATTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCAGTCATCACGGATGGCGACCCGGCCATGCGTATAGCAATCCGCACCGTTTTTCCTGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACTCGACTGCTAACATAAGCGACCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATGGAAATCGAAGAGTTCGAAGCGTATTGGGAGTCAATGGTCAATGAGTGCGGTGTCAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTAGAGTACGGACAACCTCTAGGTGCGAGTCACTACACGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGATGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTCGTTGAGCTGGAAAAGTCTGGATGGACTATGTTCACCCGCGAAATGTTTCTCAGATACCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTGATGACAGTGACAACCCTCATGCATATACTCTTCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTACTTGCAGCTGCATGCGCATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTTTGTGTAAGGCTAGACTTGGTGGAAATCCCTGAAAGCCTGGTGCTGCGTAGGTGGTCTAAGGCAGCCAAATTGGAGATACATAACCAATGTGGTGAGCAACACATTGTTGAACCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGCAAGCGTTTAGGGCGCGTTGCTTGCATGAGCGATGAAGACTTCAAGGTTTACTCAAACAAGCTTATGAGCGATGCTCTGTTCCTTGAAATAAAGTACGGCTTAAGACCATTAACGGATAATATGACAACAGCAAATGACTGCGGGGTGAAGGACCCCATTCGTGTCAGGACAAAAGGCACGGCTCGGATGAGTCAAGCAGGCGGTTCTGCGCCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTCGGGCACCGGAGGACTAGATGCCCCATCGGAGGCGCGCAACCTTCAACGAGGAACAAAGAATCACTTGCTGGCAGAAATAAACGCAAGCGAACGAAGGCACCCGTCGTTGTCCCAGATAATTGTCCGCCTGAAAATGCATGTCAAGCTGGATGCGACTTATGGGAACAATTTTCGCTTGCAGACCCCTGA 2886 0.483 MSLKKGKNDDRRSAQLKGKVKPSSPSASWRKRLRGRLHPSSFVLFVYVVKVTVAFDLWIGDNGGGWNVSKWLSQRRRCLSHPPDRTSSHHRSRVVLIKGGGDRTILFVDAWVRSPCGSGGCEDVGSMLDSRCGGKVRVFDIIMASSSKFCKDACMWNEPLVDNWMEGNAGVSNPQNAFHIMAAGSIMFVFLFQDTMYDTRVEEDAESSDWEGRGASMLPVFLGLDGLRAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKAVTRCGCLAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAVRYLEGLARMDGKMFWRYKLGSGQHLCNLFWSDGRCQEDYAIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIRTVFPDAHHRLCAWHLLRNSTANISDPRFTQMFRHCMLADMEIEEFEAYWESMVNECGVREVEWVKDLYTKKHAWATAYIRGRFFARVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWTMFTREMFLRYRDSLKRCVRVRICEFDDSDNPHAYTLQKYRRPEMNWKVYRDHISNRFTCSCMRMESFGIPCVHILSVCVRLDLVEIPESLVLRRWSKAAKLEIHNQCGEQHIVEPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKVYSNKLMSDALFLEIKYGLRPLTDNMTTANDCGVKDPIRVRTKGTARMSQAGGSAPKTKRKCSTCGKLGHRRTRCPIGGAQPSTRNKESLAGRNKRKRTKAPVVVPDNCPPENACQAGCDLWEQFSLADP 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00327 961 PANTHER OS02G0262500 PROTEIN 231 806 - -
Aip02g00327 961 Pfam MULE transposase domain 455 549 IPR018289 -
Aip02g00327 961 ProSiteProfiles Zinc finger CCHC-type profile. 891 907 IPR001878 GO:0003676|GO:0008270
Aip02g00327 961 Pfam SWIM zinc finger 744 765 IPR007527 GO:0008270
Aip02g00327 961 SMART 26again6 743 770 IPR006564 GO:0008270
Aip02g00327 961 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 231 806 IPR031052 GO:0006355
Aip02g00327 961 SUPERFAMILY Retrovirus zinc finger-like domains 873 907 IPR036875 GO:0003676|GO:0008270
Aip02g00327 961 Pfam FAR1 DNA-binding domain 246 335 IPR004330 -
Aip02g00327 961 MobiDBLite consensus disorder prediction 1 17 - -
Aip02g00327 961 ProSiteProfiles Zinc finger SWIM-type profile. 735 768 IPR007527 GO:0008270
Aip02g00327 961 MobiDBLite consensus disorder prediction 907 933 - -
Aip02g00327 961 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00327 Aip-Chr2 4428734 4433795 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g00327 MULE 1.1e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00327 - - aip:107611673 1626.68