Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00300 ATGGCGGCTCTACTCATGAACATGGCAGTTGAGCTACTGTATAGGGAAGGACTTCCGATGGTAGATGAAAGCACGTCATCGACGATAAGGAATATATATAAAATTCTCCTACAGGTCAATGACGATGTAGAGGGTCGTCAAGTGAGGGATTCAGACGTGAAGAATAGGCTGGAAAGAATTAAGGATCTATGCTACGACACCGTAGACATTCTGGAAGGACTGAAAATTCAGAAGGCTAAAAAGGTTCACTTTCTAAACCACCCTGCTTCTTTACTAAATCCTCTTCGACAACGTGGCCCCCGTAAATTGGAGGAAGTCCTCAATAAATTGATGATCCTATGCGATAGTGACAAGCTGGGACTCAAAGCCAGCTTGAATCAACTAACACTCGATAGGAGGATGTCATTACAGTCTCAATGCGGCGAGGTAAACCGAACTCGATTTGCTAACCTGAATTTACATGGTCGAGAAGGTGAAAGTTCAACTTTAGTTGATAAATTGTTGAACACAGACGGTCATATCAAGTTCATATCTGTTGTTGGAGAGGCTGGAATAGGAAAGACTGCATTGGCCCGTCTCGTCTATAACAATGAAGAAGTGATCGATCATTTCGATTTAAGGGAATGGATTTATGTCTCCAAAGAATTCAACCTGTCTAAGATCGCTCTGTCCTTGTTGGAAAATCTGACGCATGATATCATACGCAGTAAGTTTGGATTGGAAAGCTTGTTTCAGACAAGTGTTGAGATGATTTCGgggaaaaaatgccttattgttctggacgatgtttggagtgaaaacagttacgattgggaacaactaaagatccttctcagtcatggggcttctgggagtacttatttgataacgactcCCAAGAAGGCAGTTGCACGAGCAGCAGGATCCAGAGAGACAGAGTTCCTTCCTCTGAGCTATCTTTCAGATGAACATTGTTGGTCCATTGCCACGGAGACAGCATCCATACCGACAGAGGAGTTTTCCATTGAATTTCGGTCAGTTTTTGCACAGAAGTGTCTCGGGTTGCCTCTTAATGCAAAGTCTCTTGGTGATAGCTTGAGGTCAAGTTTAGGGACTGAAGAAGAATGTACAGAAGTGGTAGAAAGGTATGTCCCGAAAGCAATAGACTCCGATGAAGAAGAAGAAGAAGAATGGGGACTTCATAGTCGTTCAATTCGAACTGAGTGGGAGAAGAGAGCAAAACAACCTACAACTTCTTTGGTTCTTCAAGCAGCAATACATGGCCGTGATGATGAGCTAAGTGATTTGATTGCAAAGTTATGCCACAATGATGACCAAGTCCAAGGTATTCAAACAATTTCTATTGTAGGAATTGCTGGAATAGGAAAGACTGCTCTAGCCCAACTTGTGTACAACAGTGAAGTCGTGCGCCAGTATTTCGAATTGAAGAGCTGGGTGTATGTCTCACAGCCATTCAATCTGAAAAAGATTGCAAGGGCCATGTTGGAGTGTTTTACATCTGATCCGATACATGGGCTTGAATTGGATAGCGACCACGTTTGGAGCCAGGATTATCACAAGTGGGAACAACTAAAGAACTGCTTAGATTGCGGGGCTCGTGGAAGTACCCTCTTAATAACAACACGCAAGATGGATGTTGCACGAGTAGCTGGATCCAAAGAGATGGACATCATTCACCTGAAGAATCTTAAAGAGCAGCACTGTTTGTCCATTATCAGGGACGAGTTATCCTTCTTCTCCGATCCAGAGAAAGTCTCCAGGAGATACTGCAATTACATTACATTGAAGTGTCAAGGGGTGCCTCATATTGCAAAGTATCTTTGTTTTATCTTGCGTCGTGCACCTCCTTTCTCAAAACAGTGGCAATTATTAGAAAGGGACCTCTCAGCAGCTACAAGAGGAACTCAAAACCCAATCATGGAAGATGAACTTGATAGCGATTTGAGTTATGAAGAGGAGAGCGAGGAGGAAAAAGCAAGGCAACCGACGACTTCATTTGTTCATGCAGCAACAATACATGGACGAGATGATGTTACTGGAGCTTTAATTGAGAAGCTGCTTAGCAATGATGGTCAAGCCGAGCGCATTCAATttatttctattgtgggaggtgctggaataggaaagactgcagtgacacaacttgtttacaacactcctgaagtggagaattattttgattgcagggcatgggtatttgttggcgaggaattcaatcttAACCGGATCATAAGGTCCATTATAGAAAGTGTGACTGCTAAATCATTGAATGAGACTGACCTCGAAGCACTGTTGTTTAAATTTCGTCAAACTTTTGATCATAAGAGATGCCTTTTCGTTCTGGATGACATCTGGCTTGAAGATGATCTCCAATGGGAAGAACTAAAGCAGTGGTTCCATTTCACCGATCTGGGAAGTCGCACTTTGATTACCACAAGAAACAAGGGGATTGCAGACAGAATATGTTCAGAAACAAACATCGTGCTTCTCGATCCTCTTTCTGACTCGGCTTGTTGGTCAATTATCAAAGACTATGCATTTGGTCATTCAGTTAACGAGACAAAAGCAGAAGAAATGTTCAATGAAGTGGGAAAAGACATTGTACAGAAGTGTAACGGCGTGCCGCTGATGGCGAAATCTCTTGGTAATATCTTGCGTGGCAAGAATTCCATAAAAGAGTGGCAACAGGTATTGGCAAGTGAGACATGGGATTCAGCAGAATTGTTGTCTTCAGTTATGTTGAGCTATCTTTCGATGCCACCCGAATTGAGACAAGTCTTATTGTATTGTTCAGTCTTTCCTAAGAATCATTCCATAGATGTGGGCAAGTTAATCAAACTGTGGATGGCACAAGGTTTTATTGCCTCAGATGAAAACGAAATGGAAAGAGAGGGGTGGAAGTACATTAAACAATTGTTAGACCGCAACATCTTTGAAGAATTTAATCAGGATAGTCATGGTTGCTTCAAGTGCAAATTGGAGAGTGGAATGAGCGACTTAATCCATTTTCTTGCAAAAAATGAATCCCACAGAGTGCTTATTGACTATATGAAGGAGGCTAGAGTGGCTGATGATACAACAATACTTCGTCATTGCACCCTAATCATTGCAGCTCAATCTTCTCTGCCGGAGCCCATTGCCAATGCAAAGAAACTACGCACTTTGATGATTTTGTCTGAGAATTTCTTTTCAGATCCAACGACCCTTGCTAGAGTACTGAGTCATTTGAAGGTGGTCAGGGCATTGGACTTGAGCTCTTGTTTGATCAAAGAGCTTCCATCAAACATTGGGGAATTGTTACTTCTAAGGTATCTTGACTTATCTTTTAACCGTGATTTGAAGAAGTTGCCTAAAGCTATTTGTGGCTTGCTTCATTTGCAAACTTTAAATCTAAATGGATGTGATAGACTTCAAAAACTACCAAAAGGCATAGGAAATCTAATCAAGTTGCGGCATCTTGAGATTCTTTGGACGACAAGTCTTAGCTACTTACCAAAAGGGGTTGCAAATTTAACTTTGCTCAGAACATTGAGTCGTTTCATTGGGAGTAGTGTTGCTGGTAGCAAAGCATGCAATCTTGGAGATTTGAAAGAGCTAAATCTCATTCAAGGGTCCATCACCATAGATGGTTTGGGAGGTGAAACTTGTGCTGTTGAAGCTTCAAAAGCATGTTTGAAAAATAAGAAAGACCTGCTTGGCTTGGAACTGTGCTTTTCTTCTGTAGGTTCAGAGATTAACCACGACGAAGGTGTACTTAATGCATTGGAAGCGCCTCCTGAATTGCAATGCCTTGAGATATTCTTTTATCGAGGACAGTTGTTGCCTGATTGGATGAAAACATTGAGGAATTTAAGGCACCTAGTGCTTGCTCATTGGAGTAAATGCAGTATCTTACCCTCTCTTGGGCACCTGCTTTCTCTTGAATCACTTGAGATCAGGTATATGCCTAATGTGAAGATTGTAGGCTCTGATTTTCTAGGATTGTCACCGGACAATGCTGTCAGCTGCGACCAAGTTTCCTCATCAATAGTTGCATTTCCCAGATTGCAAAAGCTTTCCTTTGAAATCATGAATGGCTGGGAAGACTGGTCTGGCAACAGCAACCATGCCAATATCATGCCATTGCTTTCTGCTTTGTCAATTGAAAACTGCCCAAAGTTAAGGACACTTCCACAGTATATACTGGAGAAGAAAGATTTGAAACGTGATATCAAAAATTGTCCTGTTCTGGAAGCATACAACAATAATAGCAGCAGCACCAGCAACAACAACCACCATATTGTCTTATCCAATTAG 4296 0.3946 MAALLMNMAVELLYREGLPMVDESTSSTIRNIYKILLQVNDDVEGRQVRDSDVKNRLERIKDLCYDTVDILEGLKIQKAKKVHFLNHPASLLNPLRQRGPRKLEEVLNKLMILCDSDKLGLKASLNQLTLDRRMSLQSQCGEVNRTRFANLNLHGREGESSTLVDKLLNTDGHIKFISVVGEAGIGKTALARLVYNNEEVIDHFDLREWIYVSKEFNLSKIALSLLENLTHDIIRSKFGLESLFQTSVEMISGKKCLIVLDDVWSENSYDWEQLKILLSHGASGSTYLITTPKKAVARAAGSRETEFLPLSYLSDEHCWSIATETASIPTEEFSIEFRSVFAQKCLGLPLNAKSLGDSLRSSLGTEEECTEVVERYVPKAIDSDEEEEEEWGLHSRSIRTEWEKRAKQPTTSLVLQAAIHGRDDELSDLIAKLCHNDDQVQGIQTISIVGIAGIGKTALAQLVYNSEVVRQYFELKSWVYVSQPFNLKKIARAMLECFTSDPIHGLELDSDHVWSQDYHKWEQLKNCLDCGARGSTLLITTRKMDVARVAGSKEMDIIHLKNLKEQHCLSIIRDELSFFSDPEKVSRRYCNYITLKCQGVPHIAKYLCFILRRAPPFSKQWQLLERDLSAATRGTQNPIMEDELDSDLSYEEESEEEKARQPTTSFVHAATIHGRDDVTGALIEKLLSNDGQAERIQFISIVGGAGIGKTAVTQLVYNTPEVENYFDCRAWVFVGEEFNLNRIIRSIIESVTAKSLNETDLEALLFKFRQTFDHKRCLFVLDDIWLEDDLQWEELKQWFHFTDLGSRTLITTRNKGIADRICSETNIVLLDPLSDSACWSIIKDYAFGHSVNETKAEEMFNEVGKDIVQKCNGVPLMAKSLGNILRGKNSIKEWQQVLASETWDSAELLSSVMLSYLSMPPELRQVLLYCSVFPKNHSIDVGKLIKLWMAQGFIASDENEMEREGWKYIKQLLDRNIFEEFNQDSHGCFKCKLESGMSDLIHFLAKNESHRVLIDYMKEARVADDTTILRHCTLIIAAQSSLPEPIANAKKLRTLMILSENFFSDPTTLARVLSHLKVVRALDLSSCLIKELPSNIGELLLLRYLDLSFNRDLKKLPKAICGLLHLQTLNLNGCDRLQKLPKGIGNLIKLRHLEILWTTSLSYLPKGVANLTLLRTLSRFIGSSVAGSKACNLGDLKELNLIQGSITIDGLGGETCAVEASKACLKNKKDLLGLELCFSSVGSEINHDEGVLNALEAPPELQCLEIFFYRGQLLPDWMKTLRNLRHLVLAHWSKCSILPSLGHLLSLESLEIRYMPNVKIVGSDFLGLSPDNAVSCDQVSSSIVAFPRLQKLSFEIMNGWEDWSGNSNHANIMPLLSALSIENCPKLRTLPQYILEKKDLKRDIKNCPVLEAYNNNSSSTSNNNHHIVLSN 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00300 1431 PRINTS Disease resistance protein signature 1097 1113 - -
Aip02g00300 1431 PRINTS Disease resistance protein signature 698 713 - -
Aip02g00300 1431 PRINTS Disease resistance protein signature 771 785 - -
Aip02g00300 1431 PRINTS Disease resistance protein signature 871 885 - -
Aip02g00300 1431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 660 930 IPR027417 -
Aip02g00300 1431 CDD AAA 155 265 - -
Aip02g00300 1431 PANTHER DISEASE RESISTANCE PROTEIN RP 43 366 IPR044974 GO:0006952
Aip02g00300 1431 PANTHER DISEASE RESISTANCE PROTEIN RP 656 1394 IPR044974 GO:0006952
Aip02g00300 1431 SUPERFAMILY L domain-like 1028 1394 - -
Aip02g00300 1431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 376 IPR027417 -
Aip02g00300 1431 SMART AAA_5 173 311 IPR003593 -
Aip02g00300 1431 SMART AAA_5 695 833 IPR003593 -
Aip02g00300 1431 PANTHER OS05G0414200 PROTEIN 402 624 - -
Aip02g00300 1431 PANTHER OS05G0414200 PROTEIN 43 366 - -
Aip02g00300 1431 PANTHER OS05G0414200 PROTEIN 656 1394 - -
Aip02g00300 1431 Gene3D Ribonuclease Inhibitor 1028 1183 IPR032675 -
Aip02g00300 1431 Gene3D Ribonuclease Inhibitor 1185 1407 IPR032675 -
Aip02g00300 1431 Gene3D - 140 306 IPR027417 -
Aip02g00300 1431 Gene3D - 656 829 IPR027417 -
Aip02g00300 1431 Gene3D - 403 558 IPR027417 -
Aip02g00300 1431 Gene3D - 916 1007 IPR036388 -
Aip02g00300 1431 PANTHER DISEASE RESISTANCE PROTEIN RP 402 624 IPR044974 GO:0006952
Aip02g00300 1431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 623 IPR027417 -
Aip02g00300 1431 Pfam NB-ARC domain 678 900 IPR002182 GO:0043531
Aip02g00300 1431 Pfam NB-ARC domain 511 645 IPR002182 GO:0043531
Aip02g00300 1431 Pfam NB-ARC domain 161 382 IPR002182 GO:0043531
Aip02g00300 1431 Pfam NB-ARC domain 424 498 IPR002182 GO:0043531
Aip02g00300 1431 Gene3D - 833 915 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00300 Aip-Chr2 3958332 3962627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00300 1079 1177 WRKY Transcription Factor Family AT4G12020 41.414 1.36e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00300 - - ahf:112728279 669.077