LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g00277	ATGCATCAGAATCATGGGTTAGATCAGTCTCCAACCATTTCTGATGTTTCAGATCGGTATAGGCATTCTCCAATTGCATCAGTGCCTTTGTCACCAACTCTGTTGTCATCACCGGAGAGAGAATTGAATCACGGTGGTGATAATAATTCTTCTCATGCCCCTCCACAGAGGAAGCATTGGGAGATTCCTGACCTGTTGACACCACCCATTCCCGAATCTTCATCAGTGGAGAATGTGTTTGGAGCAGCAGATTCTGTTGTGGTTCCACAGAGGAAACAATGGGAGATTCCGGCGATTCCGGTGATTTCGGCACCTATTGATCCATCTGGCAGAGTTTCAGCTCCTCCTCCGCCTCCGCCACCACCTCCTCCTCCACCGCCCCTGCCGCCTACGCTGCCGCGACAGCGTAAGCAGTGGGAAGTGCCTTCTCCATCGACGCCTGTGGATCAACCAATTTCTAGGCCACCGGAGCTGACACCGCCTTCTAGGCCTTTTGTGTTGCAGACACCAAATACAAAGGTTTCTCCGGTCGAGTTGCCGCCGAATTCTTCTTCGGGTTTGGGGGTGATTGAGGAGAATTCCGAGGAGGCTTCTAAGCCAAAGCTGAAGCCTTTGCATTGGGATAAAGTGAGGGCAAGTTCTGATCGTGAGATGGTGTGGGATCAGCTGAGGTCCAGCTCCTTCAAGTTGAATGAGGAGATGATTGAGACATTGTTTGTAGTGAACACACCGAACCCCAAACCCAAGGACACTACTCCACGCTCGGTCCTTGCCCCGCCACATCAGGAGGATAGGGTGTTAGATCCCAAGAAGTCCCAAAATATTGCTATATTGCTAAGAGCACTCAACGTGACTATAGAAGAAGTGTGTGAAGCATTGTTAGAAGGTATAACCGATACACTTGGAACAGAACTGCTCGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGTAAATTGAAGGAACATAAAGATGACTCGCCAACCAAGCTTGGTCCTGCCGAGAAATTTTTGAAGGCAGTGCTTGATGTGCCTTTTGCGTTTAAACGGGTGGAAGCAATGCTTTACATTGCTAATTTTGAGTCAGAATTGGAATATCTTAGGAAATCTTTTCAAACTCTGGAGGTTGCCTGTGAAGAGCTGCGAAACAGCCGAATGTTCTTGAAGCTTCTAGAGGCAGTGCTGAAAACCGGTAACCGCATGAATGTGGGGACAAACCGTGGCGATGCACATGCCTTCAAGCTCGATACGCTTCTCAAGCTGGTTGATGTCAAAGGCGCAGACGGTAAAACCACTTTACTCCACTTTGTGGTACAAGAAATCATTAGAACCGAAGGCGCTCGCCTCTCAGGCACCAACCAAACTCCGAGCACGACCACCAACGAAGACGCCAAATGCCGGAGGCTGGGTCTACAAGTAGTGTCTAGCCTAAGCTCAGAGCTAGCAAATGTGAAGAAAGCCGCTGCTATGGATTCCGAAGTTCTAAGCAGCGAAGTTGCTAAACTCTCCAAAGGGATTGCACACATCGCCGAGGTTGTGAAGCTAAACCAAACATTAGGATCAGATGAAAGCAATCACAAATTCACAGAATCAATGAACAAGTTCATGAGAATGGCTGAGGAGGAGATACTAAAGATTCAAGCACAAGAGAGTGTTGCAATTTCTCTTGTGAAAGAGATCACTGAGTATTTCCATGGAAACTTGTCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTGGTAAGAGACTTCTTGAATGTTCTTGATAGGGTTTGTAGGGAAGTTGGTATGGTTAATGAGAGAACCATGGTTAGTTCTAATCATAGATTCCCTATACCGGTGAACCCTTTGCTTCCACAACCTCTAAACCCTATGCTTCCACAACCTCTTCCTGGTTTACATGGAAAGAGAAACTATAGTTCTTCAGATGATGATAGTTCTTCATCACCTTAA	1962	0.4679	MHQNHGLDQSPTISDVSDRYRHSPIASVPLSPTLLSSPERELNHGGDNNSSHAPPQRKHWEIPDLLTPPIPESSSVENVFGAADSVVVPQRKQWEIPAIPVISAPIDPSGRVSAPPPPPPPPPPPPPLPPTLPRQRKQWEVPSPSTPVDQPISRPPELTPPSRPFVLQTPNTKVSPVELPPNSSSGLGVIEENSEEASKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSVLAPPHQEDRVLDPKKSQNIAILLRALNVTIEEVCEALLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESELEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPSTTTNEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSEVAKLSKGIAHIAEVVKLNQTLGSDESNHKFTESMNKFMRMAEEEILKIQAQESVAISLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLNVLDRVCREVGMVNERTMVSSNHRFPIPVNPLLPQPLNPMLPQPLPGLHGKRNYSSSDDDSSSSP	653

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g00277	653	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	117	601	-	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	624	653	-	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	242	266	-	-
	Aip02g00277	653	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	192	617	IPR015425	-
	Aip02g00277	653	Gene3D	Formin, FH2 domain	186	601	IPR042201	-
	Aip02g00277	653	Pfam	Formin Homology 2 Domain	194	591	IPR015425	-
	Aip02g00277	653	SMART	it6_source	192	606	IPR015425	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	89	200	-	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	110	133	-	-
	Aip02g00277	653	PANTHER	FORMIN-LIKE PROTEIN 1	98	652	-	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	164	191	-	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	148	163	-	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	29	55	-	-
	Aip02g00277	653	PANTHER	FORMIN-RELATED	98	652	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	1	17	-	-
	Aip02g00277	653	MobiDBLite	consensus disorder prediction	1	76	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g00277	Aip-Chr2	3634491	3640258	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g00277	139	640	FH2 protein (formin) Gene Family	AT3G25500	72.925	0.0	729

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g00277	-		-	gmx:100800333	969.533