Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00242 ATGAACAAGACAGGGGACAAAATAGGGATTTTGCCATCTGAATTAAATGAGTGGAATATTCAATTTTCAAATCATCATTATGAGAGCCGTTATTATGCGCAAACAAAGGGGAAGGAAATCTCGATGGGTCCAGCTGCCCAATGTCTTAAAAATCAAGGAAGGAAAGGGCAAAATAAAGAGGGACCAATTGAGGGAGGAAGGTTTTGGGCTGTCCAAAGGGGTAGCTTTGGAGCAACTGACAACCCGACACTGTTGAATGAAGAAACGCGGGTTGAGGAGCCCCTAGCTCGGTTGGAGAAAGAAGTAGCGAACGTAGCTTGTCTACTTGCTAGGTTGCGATGGCTGTGGAGGAGAGAGGACGAGGCATCTTCGCGAGAGACTACGACCACGCAAGGACGCCGCTGTGCAGCTCAAGGAGTCGGGGGAGGAGCGGCAAACGGCAGGCAGAAGGCCGGCGATGATGTTCGGGATATGTACCTAGCAGATTGGAGCTTTGGACGTGACAATGCGGGTAGGCCAGTGGCGACAGGGGTGGAAGAAGCATATGGGACTGGGGAAGGAATAGGAAATGAAAACCAAGCAGTAGATGAGACTGATACAGGGTTGAATATGAACGAAGATTCGGCGCTACACCGAGGCAACCAAATTTGGAGTcgggaagaagaaatggcggagaataaagagCTGAGAATTTTTTTTATTTTAATTTTCGGTGACGAGAAGAATTGCGCGTTTTTTTTCAGCCAAATCACTGTTGTTGGGTTTTCTTTTGGTGCTTACCTAATGGGAAACAGTGAGGAAGGAAAATCCACCAAGATTGAAAAGTCATCTTCACCGGTAGCAACGGATCAGACCAATCAGACCAACCAGCAAAATATTCATGTTTATCCTGATTGGAGTGCCATGCAGGCATATTATGGACCAAGAGTCAACATGCCCCCATACTATAACTCGGCTGTGGCTAATGGTCATGCTCCTCATCCATACATGTGGGGACCACCACAGCCTATGATGCCACCTTATGGGCCGCCTTATGCAGCAATCTATTCGCATGGAGGGGTTTATGCTCACCCTGCAGTTGCTATTGGGCCTCATGCACATGGTCAGGGAGTTCCGACTTCGCCTGCTGCTGGGACTCCTTCAAGCGTAGAAACACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAATGAAAAAATTGAAAGGATTTGATGGGCTGGCAATGTCAATAGGCAATGGCAACACTGGAAGTGCAGAGCGTGGAGCGGAAAACAGGCTATCACAGAGTGTGGACACTGAAGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGACTAATCAAACAAGGAAAAGAAGACGTGATGGAACACCAACAACTGCAGACGGGGAAGGGAAAACTGAGATACAAGACAGTCCGGCCCCTAAAGAGAATGCAGCCAATAAGACGATTGCAACTGCCCCAATCAGTATTACAGGAACATTAGCTGCACCTGTTGTTTCTTCAGGTATGACCACAGCACTGGAGTTGATGAACCCTGCATCTCTACATCCTAGGACAAATTCCCCAAATGGGCCACAACCTTGTGCAGTTATGCCTTCAGAAGCTTGGATACAGAACGAGCGTGAGCTGAAACGTGAGAGGAGGAAACAGTCAAACCGTGAATCTGCCAGAAGGTCCAGGCTAAGGAAGCAGGCTGAGGCTGAAGAATTGGCACGAAAAGTCGAAAACTTGACTGCTGAGAATGTGTCGTTGAAATCAGAGATAAATCAATTGAGTGACAGTTCTGAGAAACTGAGGGTGGAGAATACTACATTAAGGGAAAAACTGAAAAATGCTCAACTGGGACCAGCAGATGAGATAGTTTTGAACAACACTGACAGCAACAGGGCTACCCCTGTGAGTACAGAAAACTTACTATCAAGAGTTAACAATAATTCTAGTTCTGATGATAGAACTGCTGAGGAAACTGATTTTTGTGAGAACAAATCAAACTCTGGGGCAAAGCTGCATCAACTAATGGATACAAATCCTAGAGCTGATGCTGTCGCAGCTGGTTGA 2064 0.4603 MNKTGDKIGILPSELNEWNIQFSNHHYESRYYAQTKGKEISMGPAAQCLKNQGRKGQNKEGPIEGGRFWAVQRGSFGATDNPTLLNEETRVEEPLARLEKEVANVACLLARLRWLWRREDEASSRETTTTQGRRCAAQGVGGGAANGRQKAGDDVRDMYLADWSFGRDNAGRPVATGVEEAYGTGEGIGNENQAVDETDTGLNMNEDSALHRGNQIWSREEEMAENKELRIFFILIFGDEKNCAFFFSQITVVGFSFGAYLMGNSEEGKSTKIEKSSSPVATDQTNQTNQQNIHVYPDWSAMQAYYGPRVNMPPYYNSAVANGHAPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYAHPAVAIGPHAHGQGVPTSPAAGTPSSVETPTKLSGNTDQGLMKKLKGFDGLAMSIGNGNTGSAERGAENRLSQSVDTEGSSDGSDGNTAGTNQTRKRRRDGTPTTADGEGKTEIQDSPAPKENAANKTIATAPISITGTLAAPVVSSGMTTALELMNPASLHPRTNSPNGPQPCAVMPSEAWIQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVENLTAENVSLKSEINQLSDSSEKLRVENTTLREKLKNAQLGPADEIVLNNTDSNRATPVSTENLLSRVNNNSSSDDRTAEETDFCENKSNSGAKLHQLMDTNPRADAVAAG 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00242 687 MobiDBLite consensus disorder prediction 366 397 - -
Aip02g00242 687 MobiDBLite consensus disorder prediction 515 534 - -
Aip02g00242 687 MobiDBLite consensus disorder prediction 544 566 - -
Aip02g00242 687 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 549 564 IPR004827 GO:0003700|GO:0006355
Aip02g00242 687 MobiDBLite consensus disorder prediction 515 529 - -
Aip02g00242 687 Pfam bZIP transcription factor 542 604 IPR004827 GO:0003700|GO:0006355
Aip02g00242 687 PANTHER G-BOX-BINDING FACTOR 3 262 687 - -
Aip02g00242 687 SMART brlzneu 542 606 IPR004827 GO:0003700|GO:0006355
Aip02g00242 687 Pfam G-box binding protein MFMR 262 360 IPR012900 -
Aip02g00242 687 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 544 607 IPR004827 GO:0003700|GO:0006355
Aip02g00242 687 MobiDBLite consensus disorder prediction 412 447 - -
Aip02g00242 687 MobiDBLite consensus disorder prediction 121 151 - -
Aip02g00242 687 PANTHER G-BOX-BINDING FACTOR 3-RELATED 262 687 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aip02g00242 687 Coils Coil 555 610 - -
Aip02g00242 687 Pfam Disordered region downstream of MFMR 394 520 - -
Aip02g00242 687 SUPERFAMILY Leucine zipper domain 545 600 IPR046347 GO:0003700|GO:0006355
Aip02g00242 687 CDD bZIP_plant_GBF1 547 594 IPR045314 GO:0003700|GO:0006355
Aip02g00242 687 MobiDBLite consensus disorder prediction 642 668 - -
Aip02g00242 687 MobiDBLite consensus disorder prediction 412 480 - -
Aip02g00242 687 MobiDBLite consensus disorder prediction 448 462 - -
Aip02g00242 687 Gene3D - 545 599 - -
Aip02g00242 687 MobiDBLite consensus disorder prediction 374 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00242 Aip-Chr2 3229050 3242419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00242 262 687 bZIP Transcription Factor Family AT2G46270 49.423 3.52e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip02g00242 MFMR_assoc 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00242 K09060 - gmx:100781875 608.601