Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00229 ATGGAAGATGGAGCCTACCAACAAACACTTTCTGAGAAATTGTCCCTTGCCATTGGCGTTTTCTTCAGCCTTCTTCCAATTAGAATTTCTGCAACTagaggaacctttgaagaagctttcagaaaacatgaagagaggttcaaagaagagaaggggaaagtccaaagatggagagatgcattgcaaaaagttgcaagttattccggttgggactccaaagataaGCATGAGGCAGCATTGATTGAAACAATTGTTGATCACATACAAAAATTACTGATTCCTAAGTTGCCATCATGGGTAGGAAACCTCGTTGGTGTTGAATCAAGGATGAAAAAGTTGAATTCACTCATCGGTATGCAGTTGgatgatgttcgctttataggtatacggggaatgggaggcataggaaaaacaacaactgccagattaatatatgaatcaatcgaagagcagttcaactttagttgctttcttgcaaacattagagaggtttctgcaaaaaatggcatagttcacatccaaagggaacttctttctcatctttctgtaagaagtaattactttcataatttgtatgatggggtaaaaataatagcaaactctttgcacaacaaaaaggtcctccttgttcttgatgatataagtgaaagaagccaattagagaacttagccggaaaacaagaatggtttggtcccggtagcagaataatcatcactactagagataagcatctgctaatgacacatggcgtgcatcagacatgcgagcttgaaggcttagttcagaaagaagcccttcatttattctgtctgaaagcttttaaacaagatcaacccaaaagcaaatatcagaaattgtgcaacgaagtggttgaatacacaagaggccttccattggcacttgaagtattggggtcccatctttgtggaagaactcttgaggcttggcataatgctttaaaacaaataagaagttctccacaccctgaaatccaaaattcattgaaaataagttttgaaagtttgtctagcacagagagagaaatgtttttggatattgcttgtttcttcaaaggcatgaacaaggatagagtagtagaagtgttagaaaattgtggtcattttccacaaattgatattgaaattttgattgacaaatctttggtcactcttggtagggataatatattggaaatgcatgatttacttgaagaaatgggaaagaatatagtgtttcaagaatctccaaatgatccaggaaaacgtagtagattgtggtctcaagatgacatcagccgtgcgttgacacaaaataaggtTTCTATCTTTGAAGATATTCAAGCAATAGTAGCCTATGTTCGACCATATGAAGCAAGATGGAGCTCTGAAGCTTTCTCCAAGACCAGCAACATAAGGTTGCTAAAGATACGTAATGCGTGTTGTCTTTCCCATGGCCTTGATTGCCTTCCTTATGCACTCAGAGTTCTTGACTGGCATGGATGCCCTCTGAAAACTCTGCCACTTACTGATCAACTGGATGTTGTTGACATCAATTTGTCTTGGAGCAAAATTGAACAACTTTGGCATGGAACAAAGCTCAAGAAACTTGTTCAATTGAACTTAAAAGGCTGCAAAAGGCTCAAAGCTCTTCCAGACTTTGGGAATTGCATGGGACATCTAGCAGAGCTTCATTTGGATGGAACTGCTGTAACAGAGTTACCTTCATCATTAGCATGTCTGGTTGGACTTGTTCTTTTGCATTTACAGAATTGCATGTATCTTGTTTGCCTTCCAGATACCATTCATAAGTTGAAGTCCCTCAAAGTTCTTAATGTTTCTTATTGCTCGAAACTCAGTAGCTTGCCAGAGTGCCTACAGGAAATGAATAATCTGGAAGAACTTTATGCAAGCAATACTGCCATTGAAGAACTACCTTTATGTTTATGTCATCTAGAAAACATCAAAGTAGTGTCATTTGCTGGTTGCAAAGAGTCAACATCTGAGTTAAATTGCTTTCGAGTTCCATCTGCTGTTTGCCGTCCATCCCTTTTGAGAAGGTTAGATTTAAGTTATTGCAATCTACTTGCTGAATCAATACCAGATGGTTTTTGTGGCTTATCTTTGCTGAGGGATTTGGATCTTTCTGGCAACAACTTTGTTAACCTACCAAGCGACATTTCCAAACACTCTACGCTTGAATATCTTTGTCTAAACTCGTGCAAGAAGCTTCAGTCATTGCCTGAGCTTCCATTAAGCATAAAAACACTCTACTCTCTTTGGAGAATCAAGCGTTCCTTAACTATCGGAAAAAAATGTTATTTTCAGGGGATTTGCTTTCCGAGAACACCATTCGACATGTTTATCACAGGCAATGAAATTCCATCATGGTTTGCACCTCAAAAGTCCTCTTCCTTTGCAGAAATACCATTTCCTCATCCTTCTCCTCCAACTGAATGGCTGGGATTTGCTCTGTGTTTCTTGCTGGTAGCTGATCGGCCTCTGGGCTATTACGATGCAGTGATCAGTTGTTACACGGCAACACAAACATCATTAGAGTCCTGCATACTCGTACCAGATATTCAGGCCAAAAAAATAACGGTACCGGATAAAGATCATTGGAGGGCTGAGTCTTACGTGATCACCAGGAGTGTTCCTTCCTCTTATGGAGCCAAAACAACCTCACCTTTACATTCTCTTTCTGTCCATTGGAGAATACCTTGA 2721 0.2451 MEDGAYQQTLSEKLSLAIGVFFSLLPIRISATRGTFEEAFRKHEERFKEEKGKVQRWRDALQKVASYSGWDSKDKHEAALIETIVDHIQKLLIPKLPSWVGNLVGVESRMKKLNSLIGMQLDDVRFIGIRGMGGIGKTTTARLIYESIEEQFNFSCFLANIREVSAKNGIVHIQRELLSHLSVRSNYFHNLYDGVKIIANSLHNKKVLLVLDDISERSQLENLAGKQEWFGPGSRIIITTRDKHLLMTHGVHQTCELEGLVQKEALHLFCLKAFKQDQPKSKYQKLCNEVVEYTRGLPLALEVLGSHLCGRTLEAWHNALKQIRSSPHPEIQNSLKISFESLSSTEREMFLDIACFFKGMNKDRVVEVLENCGHFPQIDIEILIDKSLVTLGRDNILEMHDLLEEMGKNIVFQESPNDPGKRSRLWSQDDISRALTQNKVSIFEDIQAIVAYVRPYEARWSSEAFSKTSNIRLLKIRNACCLSHGLDCLPYALRVLDWHGCPLKTLPLTDQLDVVDINLSWSKIEQLWHGTKLKKLVQLNLKGCKRLKALPDFGNCMGHLAELHLDGTAVTELPSSLACLVGLVLLHLQNCMYLVCLPDTIHKLKSLKVLNVSYCSKLSSLPECLQEMNNLEELYASNTAIEELPLCLCHLENIKVVSFAGCKESTSELNCFRVPSAVCRPSLLRRLDLSYCNLLAESIPDGFCGLSLLRDLDLSGNNFVNLPSDISKHSTLEYLCLNSCKKLQSLPELPLSIKTLYSLWRIKRSLTIGKKCYFQGICFPRTPFDMFITGNEIPSWFAPQKSSSFAEIPFPHPSPPTEWLGFALCFLLVADRPLGYYDAVISCYTATQTSLESCILVPDIQAKKITVPDKDHWRAESYVITRSVPSSYGAKTTSPLHSLSVHWRIP 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00229 906 Gene3D - 7 90 IPR035897 -
Aip02g00229 906 SMART LRR_typ_2 628 651 IPR003591 -
Aip02g00229 906 SMART LRR_typ_2 557 580 IPR003591 -
Aip02g00229 906 SMART LRR_typ_2 706 729 IPR003591 -
Aip02g00229 906 Gene3D Ribonuclease Inhibitor 452 775 IPR032675 -
Aip02g00229 906 Pfam NB-ARC domain 122 341 IPR002182 GO:0043531
Aip02g00229 906 Gene3D - 91 255 IPR027417 -
Aip02g00229 906 Pfam TIR domain 9 90 IPR000157 GO:0007165
Aip02g00229 906 Gene3D - 259 347 IPR042197 -
Aip02g00229 906 PRINTS Disease resistance protein signature 201 215 - -
Aip02g00229 906 PRINTS Disease resistance protein signature 126 141 - -
Aip02g00229 906 PRINTS Disease resistance protein signature 294 308 - -
Aip02g00229 906 PRINTS Disease resistance protein signature 602 618 - -
Aip02g00229 906 SUPERFAMILY L domain-like 400 760 - -
Aip02g00229 906 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 101 756 - -
Aip02g00229 906 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 101 756 IPR044974 GO:0006952
Aip02g00229 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00229 Aip-Chr2 3118846 3123284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00229 104 757 WRKY Transcription Factor Family AT5G45050 29.088 1.45e-75 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00229 - - ahf:112733298 1267.68