Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00221 ATGAGTACTCAGTCACAACAACAAAAGAAACCACAATTTGAAGATGAAGAAGAAGATAATGAGTTGCTACATTCGGACAGCGAGACAATGCCATTTTCCTCACCATTCGCGAAACAATCGGCGGTTTTAGAGGATGAAAATGCAGAATTTGTGTATGCAGCCAAGGATAAGGTCCAAATATTCGATGTAGAGTCGGCCAGAAGTGGTGGCGCCGGGTCCATGGTGGTGCCACCGTTCTCATGGAAGAAACTCTGGCTCTTTACAGGGCCAGGGTTACTCATGAGCGTGGCATTCTTGGACCCGGGCAACCTAGAAGGTGACTTACAAGCTGGAGCAATTGCAGGGTACTCTCTGCTTTGGCTTTTGGTCTGGACAACCATCATGGGAGGGCTGCTTCAAGTCCTTTCAGCTCGGCTAGGGGTCGCCACGGGGCGCCACCTGGCCGAATTGTGTAGGGAGGAGTATTCCAATTGGGCAAGGTATGTTTTGTGGATCATGGCAGAGATGGCATTGATTGCTGCTGATATTCAAGAAGTTATTGGCAGTGCTATTGCTCTCAAGATCCTTAGCCATGGGATTTTACCAATTTGGGCTGGTGTGGTTATCACAGCCTTTGATTGTTTCTTCTTTCTGTTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGGTGTTTTTGCAGTTTTCATTGGGACCATGGCATTTTCCTTTGCATGGATGTTCTTTGATACAAAGCCTAGTGAAGAAGAACTTATCAAGGGCATTTTGATCCCAAGAGTTAACTCAAAAACTCTTCGCCAAGCTGTGGAACTCATTGGATGTGTTATAACACCACACAATGTCTTCCTCCACTCTGCATTGGTGCAATCTCGGGAAATCGATATCCGGAACAAAGGCCAAGTTCAAGAGGCTCTAAACTACTACACAATCGAGTCATCGGTGGCGCTTTTCATCACATTGGTGATCAACCTCTTTGTGATAACAGTTTTTGCCAGAGTGTTCTATGGAACAGAACAAGCCAATGGAATAGGACTAGTGAATGCAGGGCAATTCCTTCAAGAAAAGTATGGAGGAGGTTTGTTTCCAATTCTATATATATGGGGAATTGGTTTGTTAGCAGCAGGACAAAGCAGCACAATTACAGGAACATATGCAGGACAATTCATAACTGAAGGGTTTTTGAAGCTAAATATAAAGAAGTGGTTAAGGTCATTGATTACTAGAAGTTGTGCTATTGTTCCAACTATGATAGCTGCTATAGTTTTTAATACATCAGAGAGTTCTTTGGATACTATGAATGAATGGCTCAATGTGGTTCAGTCAATTCAGATTCCTTTTGCACTCATTCCACTTCTTACATTGGTGTCTAAAGAAGAGGTCATGGGAACTTTTAGAATAGGTCCTATTGTAGAGAGAGTTTCTTGGTGTGTGGCTGTACTAGTGATAATGGTGTATGGATACATGTTGTTAGGGTTCTTCCTCTCTGAAGTGAAGGGATTGCTGTTTGGTTTTCTTGTATGCATTGGCTTTGTAGCATGGATATCATTCATTGCATATTTAGTTAAACATGGTGGAGCCCTCTCTTCCATCATGGTTAGGCCCCCAACTTCAAGAGGCTTTACCCTAACCACTAACAATTAA 1638 0.431 MSTQSQQQKKPQFEDEEEDNELLHSDSETMPFSSPFAKQSAVLEDENAEFVYAAKDKVQIFDVESARSGGAGSMVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLVWTTIMGGLLQVLSARLGVATGRHLAELCREEYSNWARYVLWIMAEMALIAADIQEVIGSAIALKILSHGILPIWAGVVITAFDCFFFLFLENYGVRKLEGVFAVFIGTMAFSFAWMFFDTKPSEEELIKGILIPRVNSKTLRQAVELIGCVITPHNVFLHSALVQSREIDIRNKGQVQEALNYYTIESSVALFITLVINLFVITVFARVFYGTEQANGIGLVNAGQFLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRSLITRSCAIVPTMIAAIVFNTSESSLDTMNEWLNVVQSIQIPFALIPLLTLVSKEEVMGTFRIGPIVERVSWCVAVLVIMVYGYMLLGFFLSEVKGLLFGFLVCIGFVAWISFIAYLVKHGGALSSIMVRPPTSRGFTLTTNN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00221 545 Pfam Natural resistance-associated macrophage protein 105 466 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 41 542 - -
Aip02g00221 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 41 542 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 82 460 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PRINTS Natural resistance-associated macrophage protein signature 163 189 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PRINTS Natural resistance-associated macrophage protein signature 193 212 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PRINTS Natural resistance-associated macrophage protein signature 218 239 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PRINTS Natural resistance-associated macrophage protein signature 267 290 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PRINTS Natural resistance-associated macrophage protein signature 374 393 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PRINTS Natural resistance-associated macrophage protein signature 402 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 PRINTS Natural resistance-associated macrophage protein signature 436 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip02g00221 545 MobiDBLite consensus disorder prediction 1 33 - -
Aip02g00221 545 Hamap Divalent metal cation transporter MntH [mntH]. 70 492 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00221 Aip-Chr2 3064673 3067324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00221 45 522 Inorganic Solute Cotransporters AT1G47240 73.222 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00221 K21398 - gmx:100801411 903.279