Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00207 ATGGATCCTCCATCTAAGAGCTGGAGCATCCACACCAGATCCGAAATAATCGCCAAGTACCAAATCCTGGAGCGCGTTGGCGCCGGAGCTTACGCCGACGTGTACCGCGGCCGACGCCTCTCCGACGATCTAATCGTCGCACTCAAAGAAATCCACGATTACCAGTCCGCGTTTCGCGAAATTGATGCGCTTCAGATTCTCCAGGGTGCTCCAAACGTCGTCGTTTTGCACGAGTACTTTTGGCGCGAAGATGAGGACGCTGTGCTCGTGCTCGAGTACCTAAGGACGGATCTCGCAACCGTTATTGATGACGCGAAGAAGAAGAAGAATGGACTTCCCGTTGGGGAGATTAAGCGGTGGATGATGCAGATCCTATGCGGTGTTGACGCGTGTCACCGGAACATGATCGTGCATCGGGATTTGAAGCCCGGTAATCTGTTGATCGGAGATGATGGAATTCTCAAGTTGGCAGATTTTGGACAGGCAAGGATACTTGGGGAGCCAGGATTTGATGCTTCTGAGGAGAACCCACAAACTTATGAACATGATGGTTCTTCACTCCAAGCAGGGTCTGGAAATCAAGAGCAGGGAACTGTCCTTCGCGAAGAATATTTTAGAGTCTTGGATGAACTGAAAACAAAGAGATCTGCAGATGACATTGATAAGGATACAAACATTCCTGACGGAAATACCTCCTGTCTTGCAACGTGCACAACAAGTGATATAGATGATGACCCTTTGAAATCCAGCTTTAGCTATGAAGCAAGGGAGGACGAAGGAGAAGAATCGGGTTGTCTCACGTCGTGTGTCGGAACTCGTTGGTTTAGGGCTCCTGAGCTGCTTTATGGATCCACGAACTATGGTTTAGAAATTGATCTATGGTCTTTGGGATGTATATTTGCAGAGCTTTTAACACTGGAGCCCTTATTTCCTGGAACAGCCGATATTGATCAGCTTAGTAGGATTATTAATGTTTTGGGCAACCTCGATGAGAAAGCGTGGCCAGGTTGTTCCAAACTTCCTGATTATGGAATAATCTCATTTAGTAAGGTGGAAAACCCTCCTGGTCTTGAAGCTTGCCTGCCCAATCGCTCCCCCTACGAAGTGTCTCTAGTAAAAAAGCTGGTTTGTTATGATCCGGCCAAGAGAGCTACAGCAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCGGTTTCAGAGTTGCACGTTCCTCTGAACAGAAAGGGAGAAGACGAAAACTCCCCGTGGCATGATTACAATTACATGGGTTCTGATTCTGACCTGGAGGACTTTGGCCCTGTGAATATCACAAAAACTGcacttgttgttggagctttagtttctggcttcgccaatgttgttcttgacaggctcatttcacctgagtttgtcaacttggtggtgggcaagaagctggaccggaagttggttgagaggctgaggactgctctcttggctgctgaagctctggttgctgacgccgagcagaagcagtttggaaacgatcgtgtgaggaaatggcttgatagtctcagggatgctctctacactgctgatgacttgctggaccgtgtcttcatcaaaactgaaattcgcaacaagGTATTAATGAGAATCGTTTCTTCCTCATCGGATGTTTCCAAAGTGCGCCAACTGAAAATACAAGATGATGAACGATGGCATAAAAAGATGAGACTTGATGGGGATAGTTTATCAATTAGGGGATTTGAATCTGTGGCGGAGTGTGCATTTAAGGCAAGGATCATCCACCATCTAACTTCCCTCCAAGAAATATATATCTCATGGTCTGAGTCTGTTGTATCCTTGGGGGGCAATTGTTTACCCAAATCTTTGCAAAAACTCACAATCTTTCATTGCCACCACATTGAATTACTCCAGCAACAACACAAGTATGGTTTGGTAGATCTACAAATATATGAAAGCTGTGATTCACTGACCTCATTGTCGTTGGATGCCTTTCCCAATCTCAAGAATCTGGAGATAAAAGACTGTTCAAATCTGGAATCAGTTTCAATGTCAGAGCCACCACACGCTTCTCTTCAACGTCTCACCATCTTTAACTGCCCTCAATTAGTGTCATTTCCCCAAGAAGGACTGGCTACACCCAACTTGACTCATCTCGATGTTAGCAGGTGCTTGAAGTTGGAGGCATTGCCACGTGGCATGAATACTCTTCTCCCAAATTTAGAGTCTCTCGACATACAAGGTTGCCCAAACATTTGTAGGTGGCCAGAGGGTGGTTTGCTGGCTAACCTGAAAGAGCTTAGGATAGGAGATTGCGAGGAACAAGTGAGGGGTCTATCATGGTTGGGCAACTTGGACAACCTCACTCATCTCACCATTTCTGGTGTTGGGTGTAAGAGCATAAAGTCATACCCAGAGGTGGGTTCGCTGCCTCACCTTCCCTCCCTTACCACTCTTGAGATATGCTGGTTCAAGAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCGCCTCACCTCCCTTCAGCAATTGCACATTTCAAGCTGTTGGAAGCTGGAGAATATGGCAGGAGAAAAGCTGCCTCCCTCTCTCTTGCTACTTCGAATTCGATGTTGTTCTTTGCTAGAAGAACACTGCAAGAACAAGCATCAACTAATCTGGCCCAAAATTTCCCACATCCCCACCATTAAATTCGTAGATTTCTGA 2709 0.4131 MDPPSKSWSIHTRSEIIAKYQILERVGAGAYADVYRGRRLSDDLIVALKEIHDYQSAFREIDALQILQGAPNVVVLHEYFWREDEDAVLVLEYLRTDLATVIDDAKKKKNGLPVGEIKRWMMQILCGVDACHRNMIVHRDLKPGNLLIGDDGILKLADFGQARILGEPGFDASEENPQTYEHDGSSLQAGSGNQEQGTVLREEYFRVLDELKTKRSADDIDKDTNIPDGNTSCLATCTTSDIDDDPLKSSFSYEAREDEGEESGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELLTLEPLFPGTADIDQLSRIINVLGNLDEKAWPGCSKLPDYGIISFSKVENPPGLEACLPNRSPYEVSLVKKLVCYDPAKRATATELLHDKYFNEEPLPVPVSELHVPLNRKGEDENSPWHDYNYMGSDSDLEDFGPVNITKTALVVGALVSGFANVVLDRLISPEFVNLVVGKKLDRKLVERLRTALLAAEALVADAEQKQFGNDRVRKWLDSLRDALYTADDLLDRVFIKTEIRNKVLMRIVSSSSDVSKVRQLKIQDDERWHKKMRLDGDSLSIRGFESVAECAFKARIIHHLTSLQEIYISWSESVVSLGGNCLPKSLQKLTIFHCHHIELLQQQHKYGLVDLQIYESCDSLTSLSLDAFPNLKNLEIKDCSNLESVSMSEPPHASLQRLTIFNCPQLVSFPQEGLATPNLTHLDVSRCLKLEALPRGMNTLLPNLESLDIQGCPNICRWPEGGLLANLKELRIGDCEEQVRGLSWLGNLDNLTHLTISGVGCKSIKSYPEVGSLPHLPSLTTLEICWFKNLETLECNELLRLTSLQQLHISSCWKLENMAGEKLPPSLLLLRIRCCSLLEEHCKNKHQLIWPKISHIPTIKFVDF 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00207 902 Gene3D - 459 561 - -
Aip02g00207 902 Gene3D Ribonuclease Inhibitor 594 737 IPR032675 -
Aip02g00207 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Aip02g00207 902 Gene3D Transferase(Phosphotransferase) domain 1 107 402 - -
Aip02g00207 902 PANTHER CELL DIVISION PROTEIN KINASE 12 415 - -
Aip02g00207 902 SMART serkin_6 20 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00207 902 Pfam Protein kinase domain 20 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00207 902 Pfam Protein kinase domain 263 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00207 902 Gene3D Ribonuclease Inhibitor 738 886 IPR032675 -
Aip02g00207 902 Coils Coil 483 503 - -
Aip02g00207 902 ProSiteProfiles Protein kinase domain profile. 20 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00207 902 PANTHER CYCLIN-DEPENDENT KINASE 10 12 415 - -
Aip02g00207 902 Gene3D Phosphorylase Kinase; domain 1 11 106 - -
Aip02g00207 902 Pfam Rx N-terminal domain 479 538 IPR041118 -
Aip02g00207 902 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Aip02g00207 902 MobiDBLite consensus disorder prediction 167 195 - -
Aip02g00207 902 SUPERFAMILY L domain-like 595 880 - -
Aip02g00207 902 MobiDBLite consensus disorder prediction 179 195 - -
Aip02g00207 902 SUPERFAMILY Protein kinase-like (PK-like) 13 401 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00207 Aip-Chr2 2935429 2942040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00207 4 446 Core Cell Cycle Gene Families AT4G28980 65.310 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Aip02g00207 Pkinase 3.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00207 - - ahf:112726382 1080.09