Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00192 ATGCTTCATCTAACGCTTCCACCCACCCCACTCCCCCACTTCACCATTCTCCTTCCATCACCCAAATTCTCTTCCTTCTCCTTCCACAAATGGATTATTCCCCTTTTTACCCCTCTCTTTTTCCTTCTATCCCTTCTTCTTCTTCTCCTCTTCCTCCTCCCCCATGTCCTCTTTCTTTTCCTCTCCTCCACCGCCTCCACTGCCACCACCACCACCATCCGCCGCCGCCGCCGCCTACGTCACAATAACCGCCGCAGGAACCAAAACGACGGTGTCGTTTTGCCGCGTGTCATTTTCGTAGCTGAGAACGACGTTGAAAATAACCAGCCTGGTGGAGGAAACGACAGCGCCGTTTTGGGTCTGGACCAGATCGTAATTAACTCGTACCCTAAGTTTCAGTTTAACGGCAACAACGACGTCGATGTTGACAGCGTGTGTTCGATTTGTTTGTGTGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCGGAGTGTCACCACTGCTTCCACGTGTCATGTCTTGATTCGTGGCTCAAGCTTAATGGTTCTTGCCCTGTTTGCCGGAACTCTCCGATGCCGACGCCGCTACCCACGCCGCTGCAGGAGGTGGTGCCGCTCTCTCTCTATGCCGCTGATAGGAGGGGAAGGAGTTGA 654 0.5321 MLHLTLPPTPLPHFTILLPSPKFSSFSFHKWIIPLFTPLFFLLSLLLLLLFLLPHVLFLFLSSTASTATTTTIRRRRRLRHNNRRRNQNDGVVLPRVIFVAENDVENNQPGGGNDSAVLGLDQIVINSYPKFQFNGNNDVDVDSVCSICLCEYKDSEMLRMMPECHHCFHVSCLDSWLKLNGSCPVCRNSPMPTPLPTPLQEVVPLSLYAADRRGRS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00192 217 PANTHER RING-H2 FINGER PROTEIN ATL67 57 214 IPR044289 GO:0016567|GO:0016740
Aip02g00192 217 SMART ring_2 146 187 IPR001841 -
Aip02g00192 217 PANTHER RING-H2 FINGER PROTEIN ATL67 57 214 - -
Aip02g00192 217 SUPERFAMILY RING/U-box 138 193 - -
Aip02g00192 217 CDD RING-H2_PA-TM-RING 145 188 - -
Aip02g00192 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 192 IPR013083 -
Aip02g00192 217 Pfam Ring finger domain 146 188 IPR001841 -
Aip02g00192 217 ProSiteProfiles Zinc finger RING-type profile. 146 188 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00192 Aip-Chr2 2850052 2850705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00192 120 214 C3H Transcription Factor Family AT2G35910 51.579 9.77e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00192 - - aip:107622508 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02941 04 122177348 122177992 Aip02g00192 02 2850052 2850705 PCT