Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00172 ATGGAAGAGAAACAAGAGCACCAGAGACAGAGGAGGCACGGCACGGAGACGCAGAGAAGGCGAGCCACGGCTGAGCAGGACGGCAGCTTCAACACAGACAGAGGAGGCAAGGTCTGCCGGCAAGGAGACAAGGCAGCGACTGGCGGCGAGCATCGAGCAGATACGAGCGGCGACTGGCGGCGGGGAGATGAGGCACAGCTGCCGGCAAGATGCGCGGAGACGCCGCTGCTGTGCGTGTCTACCACCACCACGCACCGCAACGTGATGGTGGACGAAGAAGGTGAATTCGCCGGCACAATTTGCTCCATTTGCTACGAAGATCTCAAACCAGTTTCCGAAGATCTTCAGTCTATCTCCATTTGCGGCCACGTCTTCCACGAGCTATGCTTGCAGCAATGGTTCGGGTACTGTTCGAGAGTGAAGAAGCACACTTGCCCCGTTTGCAAGCAGAATTGCAGGGTCAGCGATGCTTGCAGGCTTTACTTCCAATCGGTGGGAGATGTGGTCGAATCTGTTATGCATCGGAAGCCATTTGATTCTGAAGAAGATTCCGGAGTTTTGAGAAAGGAAGTGAATAGGTTGGAGGTCAGGGTCTCGGGGCTTAGTTCATAG 612 0.5556 MEEKQEHQRQRRHGTETQRRRATAEQDGSFNTDRGGKVCRQGDKAATGGEHRADTSGDWRRGDEAQLPARCAETPLLCVSTTTTHRNVMVDEEGEFAGTICSICYEDLKPVSEDLQSISICGHVFHELCLQQWFGYCSRVKKHTCPVCKQNCRVSDACRLYFQSVGDVVESVMHRKPFDSEEDSGVLRKEVNRLEVRVSGLSS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00172 203 Pfam Ring finger domain 100 149 IPR001841 -
Aip02g00172 203 MobiDBLite consensus disorder prediction 37 61 - -
Aip02g00172 203 CDD RING-H2 101 149 - -
Aip02g00172 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 195 IPR013083 -
Aip02g00172 203 MobiDBLite consensus disorder prediction 1 27 - -
Aip02g00172 203 PANTHER RING ZINC FINGER PROTEIN-RELATED 89 203 - -
Aip02g00172 203 ProSiteProfiles Zinc finger RING-type profile. 101 149 IPR001841 -
Aip02g00172 203 SUPERFAMILY RING/U-box 100 154 - -
Aip02g00172 203 MobiDBLite consensus disorder prediction 1 61 - -
Aip02g00172 203 SMART ring_2 101 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00172 Aip-Chr2 2647685 2648653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00172 92 203 C3H Transcription Factor Family AT4G01270 59.821 6.25e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00172 K11985 - gmx:100812811 182.57