Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00170 ATGTCAGTCTACGACGCAGCATTCGTAGAAACACAGCTCTCAAAGCGCACTTCCATCTTCGGCCTCCGTCTATGGGTCCTCATCGGAATCCTCGTCGGCGCTCTCATCGTCTTCTCCCTCTTCCTCCTCTCTCTCTGCTTCACCTCCCGCCGCAACCGCCGCCACCGCCGCAACCACAAGCCTCTCACTCCTCTCGTCTCCAAGGAAATCCAGGAAATCATTTCCACTCCTCCCAATCCTCAACCGCATGAACTCCACCTCGACATCGGAAAAGCTGCGGCGGCGGAGCAGCACCGCAGGGTGGTGTCTGCTGTGGCTTTCTCAAGCGGAGAGAATCTCTTGAATAACAAGGGACAAGCTGAGAGAGAATTTAGGGTAGAGGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGATTGCTTGGATACTGTGTTGAGGGCGCATACAGGATGCTTGTGTATGAATATGTTGACAACGGAAATCTGGACGAGTGGCTGCATGGGGATGTTGATTCTGTAAGCCCTCTGACTTGGGATATCCGGATGAACATCATCTTGGGAACGGCAAAAGGATTGGCTTATCTTCATGAGGGGCTCGAACCAAAAGTTGTCCACCGAGACGTGAAATCAAGCAATATACTCCTTGATCGCCAATGGAACCCAAAGGTTTCTGACTTTGGGCTCGCTAAGCTTCTCTGTTCTGATCATAGCTATGTCACAACCCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCATGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATTATGGAAATAATTACCGGAAGAAGTCCCGTTGATTATAGTAAACCCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAACTATGGTTGGCAATAGAAAATCAGAGGAACTCATTGATCCGAACCTTCCTGAAAAGCCGTCTTCAAAGGCTCTTAAGCTTGCTCTGTTGGTTGCTCTTAAATGTGTTGATCCTGATGCCACAAAGAGACCTAAAATCGGACACATAATCCACATGCTTGAGGCCGACGACATCCTATTCCGTGATGAGCAGAGGACCGCAGGAGAATCGTCGCGATCCCATCGCAATTATCATCATCATGAGCAAAAGGACTCTAGCAGAGATAGGAAGCGAATAGGTGGAGAGATCACTGATCAAAGCGAAGATGATAATAGTAGTAAAATCTTGCCCATCCCACTAGATTGA 1248 0.48 MSVYDAAFVETQLSKRTSIFGLRLWVLIGILVGALIVFSLFLLSLCFTSRRNRRHRRNHKPLTPLVSKEIQEIISTPPNPQPHELHLDIGKAAAAEQHRRVVSAVAFSSGENLLNNKGQAEREFRVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDEWLHGDVDSVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSDHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSKPQGEVNLIEWLKTMVGNRKSEELIDPNLPEKPSSKALKLALLVALKCVDPDATKRPKIGHIIHMLEADDILFRDEQRTAGESSRSHRNYHHHEQKDSSRDRKRIGGEITDQSEDDNSSKILPIPLD 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00170 415 PANTHER OS01G0323000 PROTEIN 111 398 - -
Aip02g00170 415 PANTHER OS01G0323000 PROTEIN 1 111 - -
Aip02g00170 415 SMART serkin_6 87 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00170 415 Pfam Protein kinase domain 117 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00170 415 MobiDBLite consensus disorder prediction 366 415 - -
Aip02g00170 415 Gene3D Phosphorylase Kinase; domain 1 91 159 - -
Aip02g00170 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Aip02g00170 415 ProSiteProfiles Protein kinase domain profile. 83 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00170 415 MobiDBLite consensus disorder prediction 366 403 - -
Aip02g00170 415 Gene3D Transferase(Phosphotransferase) domain 1 160 370 - -
Aip02g00170 415 SUPERFAMILY Protein kinase-like (PK-like) 118 355 IPR011009 -
Aip02g00170 415 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 111 398 - -
Aip02g00170 415 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00170 Aip-Chr2 2633731 2636407 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00170 26 359 Trihelix Transcription Factor Family AT5G38560 36.598 6.97e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip02g00170 Pkinase 2.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00170 - - gmx:100305432 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01177 06 17316063 17317828 Aip02g00170 02 2633731 2636407 PCT
Aip04g02923 04 121149418 121153948 Aip02g00170 02 2633731 2636407 PCT