Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00167 ATGGTTAGGGACGGGGGACAAGCTGAGAGAGAATTTAGGGTAGAAGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGATTGCTTGGATACTGTGTTGAGGGCGCATACAGGATGCTTGTGTATGAATATGTTGACAATGGGAATCTGGACCAGTGGCTGCATGGGGATGTTGATTCTGTAAGCCCTCTGACTTGGGATATCCGGATGAACATCATCTTGGGAACGGCGAAAGGATTGGCTTATCTTCATGAGGGGCTTGAACCAAAAGTTGTCCACCGAGACGTGAAATCAAGCAATATACTCCTTGATCGCCAATGGAACCCAAAGGTTTCTGACTTTGGGCTCGCTAAGCTTCTCTGTTCTGATCATAGCTATGTCACAACCCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCATGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATTATGGAAATAATTACCCGAAGAAGTCCCGTTGATTATAGTAAACCCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAACTATGGTTGGCAATAGAAAATCAGAGGAACTCATCGATCCGAACCTTCCTGAAAAGCCGTCTTCAAAGGCTCTTAAGCTTGCTCTGTTGGTTGCTCTTAAATGTGTTGATCCTGATGCCACAAAGAGACCTAAAATCGGACACATAATCCACATGCTTGAGGCCGACGACATCCTATTCCGTGATGAGCGGAGGACCGGAGGAGAATCGTCGCGATCCCATCGCAATTATCATCATCATGAGCAAAAGGACTCTAGCAGAGATAGAAAGCGAATAGGTGGAGAGATCACTGATCAAAGTGAAGTTGATAATAGTAGTAAAATCTTGCCCATCCCACTAGATTGA 912 0.4474 MVRDGGQAEREFRVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVDSVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSDHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITRRSPVDYSKPQGEVNLIEWLKTMVGNRKSEELIDPNLPEKPSSKALKLALLVALKCVDPDATKRPKIGHIIHMLEADDILFRDERRTGGESSRSHRNYHHHEQKDSSRDRKRIGGEITDQSEVDNSSKILPIPLD 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00167 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Aip02g00167 303 PANTHER OS01G0323000 PROTEIN 4 286 - -
Aip02g00167 303 Gene3D Transferase(Phosphotransferase) domain 1 48 255 - -
Aip02g00167 303 PIRSF TyrPK_CSF1-R 19 73 - -
Aip02g00167 303 PIRSF TyrPK_CSF1-R 210 299 - -
Aip02g00167 303 PIRSF TyrPK_CSF1-R 61 173 - -
Aip02g00167 303 MobiDBLite consensus disorder prediction 254 303 - -
Aip02g00167 303 SMART serkin_6 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00167 303 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Aip02g00167 303 MobiDBLite consensus disorder prediction 254 286 - -
Aip02g00167 303 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 4 286 - -
Aip02g00167 303 Pfam Protein kinase domain 8 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00167 303 SUPERFAMILY Protein kinase-like (PK-like) 7 243 IPR011009 -
Aip02g00167 303 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00167 Aip-Chr2 2618241 2621642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00167 5 247 Trihelix Transcription Factor Family AT5G38560 46.245 2.35e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip02g00167 Pkinase 5.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00167 - - aip:107626519 520.005