Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00114 ATGCTCGATTATCAGTGCTCGCGTTTCTGCTCGTGCTTTGAGCTTCTCTATTTTGAGATTCTCATGTTCGATCATTACTGCTCGCCCTTCATCTCTGATTTCTTCCAATTTGCCGGCATTCTTCTGCTAGTATTCACCATTGCCAGTCACTATTCTGCAGGATGGAACTCAAGTGCAGCTAATGCCACTAAGTTCCAGAAATGTCTCGCCGCAAAAAATGGAGGAGGAGCTGATCTTGTTGCCAACTGTACTTCAGCTTCTGCTTCAGGTTGGGAAACATTCAAGCTATGGTGGGTCAGTGACACATCTTTCAATTTTAGAGTGTTTAACAAGCAATTTCTTAGGATGGAAAAGAAAAGTAATGGTTTCTCGAGAGGTGCATCAATGTATCGTGGAGTTACAAGGCATCACCAACATGGGAGATGGCAAGCAAGAATTGGAAGGGTCGCCGGAAACAAAGATCTTTACTTAGGAACATTTAGTACGGAAGAAGAGGCTGCAGAAGCTTATAGCCAGAGTTTTTAA 525 0.4324 MLDYQCSRFCSCFELLYFEILMFDHYCSPFISDFFQFAGILLLVFTIASHYSAGWNSSAANATKFQKCLAAKNGGGADLVANCTSASASGWETFKLWWVSDTSFNFRVFNKQFLRMEKKSNGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYSQSF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00114 174 CDD AP2 128 170 IPR001471 GO:0003700|GO:0006355
Aip02g00114 174 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 118 170 - -
Aip02g00114 174 ProSiteProfiles AP2/ERF domain profile. 129 174 IPR001471 GO:0003700|GO:0006355
Aip02g00114 174 SMART rav1_2 129 173 IPR001471 GO:0003700|GO:0006355
Aip02g00114 174 Gene3D AP2/ERF domain 132 173 IPR036955 GO:0003700|GO:0006355
Aip02g00114 174 Pfam AP2 domain 130 170 IPR001471 GO:0003700|GO:0006355
Aip02g00114 174 Gene3D - 53 131 - -
Aip02g00114 174 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 118 170 - -
Aip02g00114 174 SUPERFAMILY DNA-binding domain 128 172 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00114 Aip-Chr2 2047406 2050340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00114 97 170 AP2-EREBP Transcription Factor Family AT5G57390 65.909 4.80e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aip02g00114 AP2 5.6e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00114 K09285 - jre:108980889 115.546