Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00109 ATGGCACCTTGTTCATCACTCCTATGGCCATTCAAGTCACTCTCCTTCCAAATTCTCTTTATTGTTGCTGAGTCCACAACAAATTTCAACAACCTCATATCTCATGCACCAAAAGATGCCACGATCTTGGATCCTTTTGTTCCTACTTTGCCCTCACCACGTGCCTTACAAGATGGTACCCTGTTGATCTCTCCTGTGGCTATCCAAGTCACTGTCCTTCCAAATTCTGGTTTCACTATATGCGTGACTTTTAGCCATATGGTTGGTGATGGAAGAGCCTTTCATAACTTTCTCAAGTTTTGGTCTTCACTTTGTATGTCAAAAAGGGTTACGTCTTCTTTCGACGAGAGCTTACTTTCTTTCCCGATCCTTGCTAGGGACAAAATTGAAGATCCAAATAAGCTTAAGCCTAATTTCTTAGAAGAAATGTGGAATATGTCCTTAAATAGCATAGCTTGGATGGACTCTGTTATTCCATATAATGCTACGAATGACATGGTGAGACAAACTACTGTGTTGAGGCCTGAGCATATTGAGAATTTGAAGAAATTAGTGTCTATGAAGTGCCAAAGCCTTGGTGAAGGGACATCATTACACGTGTCAACGTTTGTGGTGACATGCTCTTTGATTTGGGTTTCTAATGTTATGTTAGGATTGACCCATGTTGGTGTTGAAGAATTTCCCAATGAAGATGAAGAGGTATACTTTTTGTTCTTTGCAGATTGTCGTTACCTTAGTGAATTAAAAATACCCTTAACATACTTCGGGAATTGTTTGGCTGGTGCTTTAGTAGCAATTCAGAAGAGCAAGCTAGTGGGACAAAATGGTATTTTTGAGGCAGCTATTGCTATTGGAAGTAAAATTAGAGATGTTCAATCTGAACCCTACGAAGGTGTTGAAGGATTGATGTCATTAGCTATGATGAAAAATAATGCAGCAATGACTCAACGTGTGTTGGCTGTTACAGGTTCATCAAAGTTTGGTTCATATGAGACCGACTTTGGGTGGGGAAAACCCAAACTGAATGAATTACTTCATGCAAATTATCCAGGAATATTCTCTCTCTCTCCTTGCAGGGACATAGATGATGGAGTTGAAGTTGGAGTTGCACTGGAAACTGATCGTATTGACAAGTTCAATATCATTTTAAACGAGCTCCTTACAAATACTGCAGATCTTCAAGATTAA 1188 0.3948 MAPCSSLLWPFKSLSFQILFIVAESTTNFNNLISHAPKDATILDPFVPTLPSPRALQDGTLLISPVAIQVTVLPNSGFTICVTFSHMVGDGRAFHNFLKFWSSLCMSKRVTSSFDESLLSFPILARDKIEDPNKLKPNFLEEMWNMSLNSIAWMDSVIPYNATNDMVRQTTVLRPEHIENLKKLVSMKCQSLGEGTSLHVSTFVVTCSLIWVSNVMLGLTHVGVEEFPNEDEEVYFLFFADCRYLSELKIPLTYFGNCLAGALVAIQKSKLVGQNGIFEAAIAIGSKIRDVQSEPYEGVEGLMSLAMMKNNAAMTQRVLAVTGSSKFGSYETDFGWGKPKLNELLHANYPGIFSLSPCRDIDDGVEVGVALETDRIDKFNIILNELLTNTADLQD 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00109 395 Gene3D - 162 390 IPR023213 -
Aip02g00109 395 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 17 391 - -
Aip02g00109 395 Pfam Transferase family 20 380 - -
Aip02g00109 395 Gene3D - 14 154 IPR023213 -
Aip02g00109 395 PANTHER - 17 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00109 Aip-Chr2 1958336 1959523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00109 18 386 Monolignol Biosynthesis Gene Families AT5G48930 21.990 1.35e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00109 - - ahf:112729058 756.133