Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00103 ATGGAAGAAGTTAAAGTTGAAATCATTTCTAAAGAAAATATTAAACCTTCATCTCCCACACCCTCTCACTTAAAAACCTTCAAACACTCCTTTTTAGATCAACTTGTTCCTTTTCCTCATGCAACAATCATCCTATTCTACACCTCACAAAATCCCTTTGAATTTTCTGAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTTTTGCTGGAAAGATCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGTCAAAGTGAATTGTTCTATTTCAAAGTTTCTAAAAAAGCCTGATTTGAATTCATTGAACAAGTTTATTCCAACTACTCCAAACTTTGAAAAAACAATGACAGGAGCTCATGTGATTAACATTCAAGTTAATATCTTTGATTGTGGTGGAATTGCAATTGGATTTCGCATTTCTCATAGGATCGCTGATGGTGATTCAATTGACACCTTCCTGAAGGCATGGACAGAAAGAGCCGGCTACAACTGCAATTCAGAACTTATGACAGAACCAAACTTTGCTACAAGTTCGCTGTTCCCTACAAGTACTTCACATTTCAGAAACTTGTCAAGGAAAACATGGGGTTCCATTTTTAGGAAAGAAAAATGGGTCACAAGGAGGTTTTTGTTCAAAAATTCAGCTATTGCTACCCTCAAGGCTCAAATAGTGGCAACATCTTCATCTGACCCATTGAAGAATCCTCCTAATACTCCTTCACGTGTTCAGACAGTTTCTGCATTGTTCTGGAAGTATTTCATGGCCGCATCCAAGGATCAATTTGGAACTCAAAGTCCTTCTATACTGATTAACACGGTGAACCTTCGCCGAAGAATGCCAGAGTCTCTACATCCTGAGAATTCTATAGGGAATTTTCTATGGTTGGCAACTTCAGAACACACGAGTGAGCATGAGCTGAATTTGAATGAGTTAGTGAATAAAGTGAAGAAGTCAATTGAAGAAGTTGATAAGGATTTTGTTGCAAGGTTGCAAAGTGAAGAGGAAGGGAGTTCAATCATGGAAAATGCTCTTAGGAAAATTAGCGGTGAAACATGGTCTGATAATAAGGGTGATAAGGCATTGGAAATATTAGCTATTAGTAGTTGGTGTAACTTTGGATTCTATGATGCTGATTTTGGATGGGGAAAACCTATGTGGGTGAGTAGTATTGGTATAGAAAGTATTTCAGTGTTAACGAATATGTTAATCTTGGTTGATACTAAGTTCAAAGATGGTATAGAAGCTTGGATTACCTTGGATGAAGAGAAAATGAAGCTTTTGATGTCAAGCACTGAATTACTCACTTATGCAACTCTTGATCCAAGTCCTTTGACAGGGTCTAACTCAGGCTTTCAGGCTTGA 1407 0.3724 MEEVKVEIISKENIKPSSPTPSHLKTFKHSFLDQLVPFPHATIILFYTSQNPFEFSERLELLKQSLSETLTQFYPFAGKIKDDLSIDCNDEGANFVVVKVNCSISKFLKKPDLNSLNKFIPTTPNFEKTMTGAHVINIQVNIFDCGGIAIGFRISHRIADGDSIDTFLKAWTERAGYNCNSELMTEPNFATSSLFPTSTSHFRNLSRKTWGSIFRKEKWVTRRFLFKNSAIATLKAQIVATSSSDPLKNPPNTPSRVQTVSALFWKYFMAASKDQFGTQSPSILINTVNLRRRMPESLHPENSIGNFLWLATSEHTSEHELNLNELVNKVKKSIEEVDKDFVARLQSEEEGSSIMENALRKISGETWSDNKGDKALEILAISSWCNFGFYDADFGWGKPMWVSSIGIESISVLTNMLILVDTKFKDGIEAWITLDEEKMKLLMSSTELLTYATLDPSPLTGSNSGFQA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00103 468 Pfam Transferase family 5 448 - -
Aip02g00103 468 Gene3D - 3 204 IPR023213 -
Aip02g00103 468 PANTHER VINORINE SYNTHASE-LIKE 6 460 - -
Aip02g00103 468 PANTHER F21J9.9 6 460 - -
Aip02g00103 468 Gene3D - 216 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00103 Aip-Chr2 1823130 1824822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00103 4 442 Monolignol Biosynthesis Gene Families AT5G48930 24.236 3.81e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00103 - - aip:107628104 749.199