Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00100 ATGGAAGAAGTTAAAGTTGAAATCATTTCTAGAGAAAATATTAAACCTTCTTCTACACCCTCTCACCTAAAAACCTTCAAACACTCCTTTTTAGATCAACTTGCTCCTTTTCCTTATGCAAAAGTCATCCTATTCTACGCCTCACAAAATCTCTCTGGATTCCCTAAGAGATTAGAGTTACTTAAACAATCATTATCTGAAACACTAACACAATTCTATCCTCTTGCTGGAAAGATCAAAGATAATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCCAAACTGAATTGTCCTATTACAAAGTTTCTAAAGAAGCCTGATTTGAATACACTGAACAAGTTTCTTCCAACTACTCCATACATTGAAGAAACAATGATAGGAGCTTATGTGACTAATATTCAAGTTAATGTCTTTGATTGTGGTGGAATTGCAATTGGATTTTGCATTTCTCATAGGATCATTGATGGTGATTCACTTGACACCTTCCTGAAGGTGTGGACAGAAAGAGCAAGCTGCAACCACAATTCAAAACTATTGACAAAACCAAATTTTGCTACAAGTTCCTTGTTCCCTACAAGTACTTTACATTTCAGAGACTTGTCAAAGAAAACATGGGGTTCCATTTTTAGAAAAGGAAAATGGGTTACAAGGAGATTTCTGTTCAAAAATTCAGCTATTGCCACTCTCAAGGCTCAAATAGTGGCAAAATCTTCATCTGATCCATTCAAGAATCATCCTAATACTCCTACACGTGTTCAGATAGTTTCTGCATTGTTCTGGAAGTATTTCATGGCCGCATCCAAGGATCAATTTGGAATTCAGAGGCCTTCTATTCTGCTGAATACGATGAATCTTCGCCGAAGAATGGCAGAGTCTCTACATCCTGAAAATTCTATAGGGAATTTTCTGTGGTTGACAATTTCAGAACACAAGAGTGAGCATGAGTTGAATTTGAATGAGTTGGTGAGTAAAGTGAAGAAGTCAATTGAAGAAATTGATAAGGATTTTGTTGCAAGGTTGCAAAGTGAAGAGGAAAGGAGATCAATCAGAGAAACTTTTTTTAGGAAAATGAGTTTGTCTAATAATAAGGGTGATGAGGTATTGGAAGGATTAAATGTTAATAGTTGGTGTAACTTTGGATACTATGATGCTGATTTTGGATGGGGAAAACCTATGTGGGTGAGTAGTGTTGGTGTACAAGGTAATTCAGTGTTAGGGGATAAAATAACCTTGGTTGATACTAAGTTTAAAGATGGTATAGAGGCTTGGGTTACCTTGGATGAGGAGAAAATGAAGTATTTGGTGTCAAGCACTGAATTACTCACTTATGCAACTCTTGATCCAAGTCCTTTGGCAATGTCTAACTCAAGGTTATAG 1389 0.3636 MEEVKVEIISRENIKPSSTPSHLKTFKHSFLDQLAPFPYAKVILFYASQNLSGFPKRLELLKQSLSETLTQFYPLAGKIKDNLSIDCNDEGANFVVAKLNCPITKFLKKPDLNTLNKFLPTTPYIEETMIGAYVTNIQVNVFDCGGIAIGFCISHRIIDGDSLDTFLKVWTERASCNHNSKLLTKPNFATSSLFPTSTLHFRDLSKKTWGSIFRKGKWVTRRFLFKNSAIATLKAQIVAKSSSDPFKNHPNTPTRVQIVSALFWKYFMAASKDQFGIQRPSILLNTMNLRRRMAESLHPENSIGNFLWLTISEHKSEHELNLNELVSKVKKSIEEIDKDFVARLQSEEERRSIRETFFRKMSLSNNKGDEVLEGLNVNSWCNFGYYDADFGWGKPMWVSSVGVQGNSVLGDKITLVDTKFKDGIEAWVTLDEEKMKYLVSSTELLTYATLDPSPLAMSNSRL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00100 462 Pfam Transferase family 5 444 - -
Aip02g00100 462 Gene3D - 216 447 IPR023213 -
Aip02g00100 462 Gene3D - 3 202 IPR023213 -
Aip02g00100 462 PANTHER F21J9.9 6 457 - -
Aip02g00100 462 PANTHER VINORINE SYNTHASE-LIKE 6 457 - -
Aip02g00100 462 Coils Coil 315 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00100 Aip-Chr2 1793026 1794414 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00100 4 403 Monolignol Biosynthesis Gene Families AT5G48930 23.501 5.67e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00100 - - aip:107628104 931.398