Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g00098 | ATGGGTTTTCCGGTGGGCTACACGGAGGTTTTCTTCCCTCACCTCTTCCTCCGCTTACTCACCTTCCTCGGCCTCCTCCGTAACCTCGTCTTCCACCTCTTCCGCCTCCTCGGACTCTCTGAACTCCTCATCGACACCACCACCGACAACAACAACAACTACTACAACCACAACCCCAACCCAACCCGGACCCCCTCCGCCGTCGACCGTACACCATCCCTCTCCGCCATCCTCATCCGCGAGTTCCTCCCCGTCGTAACCTTCAGAGAAATCCTGGCTAACGATGACGTGGCATCGCCTCAACTAACTGGCAGCTGCGCGGTTTGCCTAACGGAATTAGTTATGGAGGACGAGATCCGGTGGTTGCGTAACTGCAAGCACGTGTTCCACAGGGAGTGTGTGGACCGTTGGATTGATCACGATCAGAAGACGTGTCCGCTTTGTAGGACGTCGTTTGTTCCTGATGAAATGGTTGATCAGTATAATCAACGGTTGTGGGCTGCTTCTGGTGTTAGTGAGTTCTACGTAGATTACACTTCTCTCTAA | 546 | 0.5385 | MGFPVGYTEVFFPHLFLRLLTFLGLLRNLVFHLFRLLGLSELLIDTTTDNNNNYYNHNPNPTRTPSAVDRTPSLSAILIREFLPVVTFREILANDDVASPQLTGSCAVCLTELVMEDEIRWLRNCKHVFHRECVDRWIDHDQKTCPLCRTSFVPDEMVDQYNQRLWAASGVSEFYVDYTSL | 181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g00098 | 181 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 179 | - | - | |
Aip02g00098 | 181 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 154 | IPR013083 | - | |
Aip02g00098 | 181 | PANTHER | BNACNNG20990D PROTEIN | 1 | 179 | - | - | |
Aip02g00098 | 181 | CDD | RING-H2 | 106 | 149 | - | - | |
Aip02g00098 | 181 | Pfam | Ring finger domain | 105 | 149 | IPR001841 | - | |
Aip02g00098 | 181 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 149 | IPR001841 | - | |
Aip02g00098 | 181 | SUPERFAMILY | RING/U-box | 83 | 155 | - | - | |
Aip02g00098 | 181 | SMART | ring_2 | 106 | 148 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g00098 | Aip-Chr2 | 1766568 | 1767395 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g00098 | 1 | 180 | C3H Transcription Factor Family | AT1G63840 | 43.407 | 1.27e-44 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g00098 | K16281 | - | gmx:100790975 | 200.675 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip04g02875 | 04 | 120319362 | 120320335 | Aip02g00098 | 02 | 1766568 | 1767395 | PCT |