Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00095 ATTTTCAACTCAATGAGATTGGATGGTGCTAATGGCGACGAATTCACTTTTAGCTGCCTGCTAAGTATATGTGATATTTTAGAATATTATGATTTTGGAAAGCAAGCTCATAGTCTTATTCTGAAACTGTCACTTGAATCCGATATTCTAGTGGCGAGTGCATTAATCAATATGTACGCAAAAAATGAAGATGTCATTGATGCAAAGAGAGTGTTTGACAAGATGGCGATTCGAAATGTTGTGGCATGGAATACCATGATTGTTGGGTGTGGAAATAGTGGCAAAGTGATTGATGTTATGAAGATTCTCAGAGATATGTTACTCGAAGGAATTTTCCCCGATGAACTCACTATTTCCAGCGTTCTTAGCTCGTGTGGCTATGCTTCTGCCATAACTGAAACTCAGCAAGCTCATGCCTTAGCAGTTAAGCTGTCATTTCAAGAATTTGTATCTGTTTCCAATTCTTTGATTACTGCATACTCCAAGTGTGGTAACATAACTAATGCATTCAAATGCTTCAGATTGATGTTAGAACCTGATCTTGTTACATACACTTCATTGATAAATGCATATGCATTCCATGGTCTTGGCAAAGAAGCAACTGAGATGTTTGAGAAGATGATATCTTGCGGCATAAAACCTGACCGGATTTCTTTTCTTGGCATTCTCTCTGCTTGTGTGCATTGTGGATTCGTGAACGCAGGACTGCACTACTTCAAATTAATGACAGATGTGTATCGTATTATTCCTGATTCAGATCACTATACTTGCCTTATTGATCTCCTTGGAAGACATGGTTACATAAACGAAGCCTTTGAATTCTTGAAATCAATTCCAATTCAAGCTGAATCGAACATGTTAGGAGCATTCATTGGGTCTTGTAAACTGCATGAAAATATAGAACTGGCTAAATTGGCAGCAGGAAAGCTTTTTGCAATAGTTCCAGAGAAGATTGTGAACTATGCTGTCATGGCTAACATTTATGCTTCTCATAATCACTGGCTTGATGCTGAAAGAGTTCGAAAAACCATGAGGGACAAGGATGTTGCTAAATTCCCAGGCTGTAGCTGGATACAGGTTGGTAATCAAGTTCATTCATTTGTGTCTAGTGATAAGGTACACCCTAAACTTTTGCAAATTTATGCTACACTAAAAATGTTGCTTAGGTCAATGAAAGAAGAAAATGGTccattgtgtttctctctctctctgagagctcctctctctctcttcgaagccccatacctgcagccgcgacagcaacaacgaagctccccttccagcgGTCGCCGGAACTCCAGCTCCGACTACCGGAGTACGCCGGAACGCGGTGGATATTCTCCTGGATACGCGTCTTCCGAGGTCAGCGCCAAGTCAACCTCTTCCTCCACCGCCTCCGGTGGCCGGAGTTCGGTCTCCTCCGCCGCTAGGTCTGTAGCCGGAATCTTCACCGCCTGCTTCGCGCCGCCGGAAGCCACCATCAGAAGCTCCAAGAGCTTCGGGGATTCTGAGGAGTTCAAAGCTCCATCTGTTGCATCGGATGTTTCGAGAGCTAGTAGTCAGAAAGGGCGCGGCTCGAATCGAGGCATCAACATCAGCACAAATAAAGAGCCTGGCACTGTAAAATTCACCATGGAGGAAATCCAGAAAGCCACAAGAAACTTCTCCTCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTACTGTCTACAAGGCCAAACTATTGGATGGAACAGTGGTTGCAGTAAAGCGTGCAAAGAAGAGTCTATATGAGAAGCATTTGGGTGTAGAGTTCCAGAGTGAGATACAAACACTATCAAGGGTTGAACATTTGAACTTGGTCAAGTTCTATGGATATTTGGAGCAAGGGGATGAAAGAATTATTGTTGTGGAGCATGTTCCAAATGGAAACCTAAGAGAACATTTGGATTGCATTCATGGAAAAGTTCTTGACCTTCCTACACGTCTAGACATTGCAATTGATGTAGCTCATGCCATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACGTTAAATCTTCCAACATTCTGCTGACCGAAAATTTTCGAGCTAAGGTAGCAGATTTTGGTTTTGCAAAACAAGCACCAGATAGTGACTCCGGCATGACTCATGTATCCACCCAAGTTAAAGGAACAGCAGGCTACTTGGACCCTGAATACCTGAAAACATATCAACTGACTGAAAAGAGTGATGTGTATTCATTTGGTGTTTTGCTTGTTGAACTCACCACAGGGAGACGTCCCATTGAACCGAAATTCGAACTCAGAGAGCGAATAACTGCAAAATGGGCTATGAAGAAATTTGTGGATGGAGAAGCTACCACTGTCTTGGATCCAAGACTTGATCAAACTGCAGCAAATACACTTGCACTTGAAAAGATTCTTGAACTAGCATTGCAGTGTTTGGCACCTCGGAGACAAAACAGGCCTAACATGAAGAGATGCGCCGAGATCCTTTGGACTATCCGCAAGGATTACAGGGAGCTATCAGCCTCAGATTTTCGCTCGTTTTCTTCTACTTCCCAGAGGAGCTCTTCAATAAGAGACTGA 2583 0.4069 IFNSMRLDGANGDEFTFSCLLSICDILEYYDFGKQAHSLILKLSLESDILVASALINMYAKNEDVIDAKRVFDKMAIRNVVAWNTMIVGCGNSGKVIDVMKILRDMLLEGIFPDELTISSVLSSCGYASAITETQQAHALAVKLSFQEFVSVSNSLITAYSKCGNITNAFKCFRLMLEPDLVTYTSLINAYAFHGLGKEATEMFEKMISCGIKPDRISFLGILSACVHCGFVNAGLHYFKLMTDVYRIIPDSDHYTCLIDLLGRHGYINEAFEFLKSIPIQAESNMLGAFIGSCKLHENIELAKLAAGKLFAIVPEKIVNYAVMANIYASHNHWLDAERVRKTMRDKDVAKFPGCSWIQVGNQVHSFVSSDKVHPKLLQIYATLKMLLRSMKEENGPLCFSLSLRAPLSLFEAPYLQPRQQQRSSPSSGRRNSSSDYRSTPERGGYSPGYASSEVSAKSTSSSTASGGRSSVSSAARSVAGIFTACFAPPEATIRSSKSFGDSEEFKAPSVASDVSRASSQKGRGSNRGINISTNKEPGTVKFTMEEIQKATRNFSSSFKIGQGGFGTVYKAKLLDGTVVAVKRAKKSLYEKHLGVEFQSEIQTLSRVEHLNLVKFYGYLEQGDERIIVVEHVPNGNLREHLDCIHGKVLDLPTRLDIAIDVAHAITYLHMYIDHPIIHRDVKSSNILLTENFRAKVADFGFAKQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELTTGRRPIEPKFELRERITAKWAMKKFVDGEATTVLDPRLDQTAANTLALEKILELALQCLAPRRQNRPNMKRCAEILWTIRKDYRELSASDFRSFSSTSQRSSSIRD 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00095 860 Pfam Protein kinase domain 559 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00095 860 MobiDBLite consensus disorder prediction 510 536 - -
Aip02g00095 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Aip02g00095 860 PANTHER RECEPTOR-LIKE PROTEIN 55 430 850 - -
Aip02g00095 860 Pfam PPR repeat family 179 227 IPR002885 -
Aip02g00095 860 Pfam PPR repeat family 78 125 IPR002885 -
Aip02g00095 860 Gene3D Tetratricopeptide repeat domain 1 152 IPR011990 GO:0005515
Aip02g00095 860 Gene3D Tetratricopeptide repeat domain 153 380 IPR011990 GO:0005515
Aip02g00095 860 SUPERFAMILY Protein kinase-like (PK-like) 532 833 IPR011009 -
Aip02g00095 860 MobiDBLite consensus disorder prediction 415 471 - -
Aip02g00095 860 Pfam PPR repeat 154 178 IPR002885 -
Aip02g00095 860 Pfam PPR repeat 53 76 IPR002885 -
Aip02g00095 860 Pfam PPR repeat 254 277 IPR002885 -
Aip02g00095 860 Gene3D Transferase(Phosphotransferase) domain 1 633 854 - -
Aip02g00095 860 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 79 113 IPR002885 -
Aip02g00095 860 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Aip02g00095 860 MobiDBLite consensus disorder prediction 452 471 - -
Aip02g00095 860 ProSiteProfiles Protein kinase domain profile. 555 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00095 860 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 430 850 - -
Aip02g00095 860 Pfam E motif 297 359 IPR046848 -
Aip02g00095 860 MobiDBLite consensus disorder prediction 415 441 - -
Aip02g00095 860 ProSitePatterns Protein kinases ATP-binding region signature. 561 587 IPR017441 GO:0005524
Aip02g00095 860 TIGRFAM PPR: pentatricopeptide repeat domain 182 215 IPR002885 -
Aip02g00095 860 TIGRFAM PPR: pentatricopeptide repeat domain 81 115 IPR002885 -
Aip02g00095 860 MobiDBLite consensus disorder prediction 513 536 - -
Aip02g00095 860 Gene3D Phosphorylase Kinase; domain 1 515 632 - -
Aip02g00095 860 CDD STKc_IRAK 561 830 - -
Aip02g00095 860 SMART serkin_6 555 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00095 Aip-Chr2 1626470 1707687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00095 1 392 Glycoside Hydrolase AT3G49170 34.351 2.59e-77 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Aip02g00095 Pkinase 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00095 - - cic:CICLE_v10023685mg 911.753