Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00092 ATGCCACTCTCTTACACTCTCTTCTTCTTCTTCTTCCTTCAACGCATTCTAACCTTCACCATTGCAACCTCTTCCACCACCATTATTCTAGAAGGAAGCACCACACTCCGAAGCCCAAACAACACCTTCGAACTCGGAATCTTCAACTTGCCATCTTCCAACAACTTCTACCTCGCAATCCGCTACGCTTCACTCTCAAAACAAACCCTCATTTGGGTCGCTAACCGCCGTCAACCCTCCCCAACCCAAACCAATACCACCCTTCAGCTCACCAACACCACCACCACGTGCCACCTCAGCCTCACTCACCCCCAAACCTCACTACCTCTATGGCAAACCCCAACTCCAAAAGGCCCTTCCTTTTCTTCTTGCAATGTTCAGTTACTGGAAAATGGAAACTTGGTTCTTCTCTCTTCCGAAAATGGCACCGTTTTGTGGCAGAGCTTCGACGAACCAACTGACAAGTGGCTTCCGGGTATGAACTTGACCCGAACCCAATCTCTTGTTTCGTGGAAAACCGAAACGGACCCTTCGCCGGGGCTTTACTCTCTGCGGCTGAAACCACCGGATTACGGTGAGCTTGAGCTTGTTTTCAACGGCACCGATTCGTACTGGTCCACCGGAAACTGGACCGGTAATTTTTTCACCGGAATTCCTGAGATGACGAATCCGTACATTTACCGGTTCCATTTCGAGGAGCCTTTTACTGCAGCTGCGTCGTTTGGGTTCACAGAGACGACTTCGGATAGTGGCTTTGTTCCGACGATGTTCGGAGTTTGCAAAGGTCATGAAAGTTCTGAACTTTGTGTTTGTGTTGATGGGTTTGGGCCTTCTGATGAAGTGGGTTGGGGGAATGGGGATTACACTATGGGTTGTGTTCGTAAAAAAATGGATTCTTGTGATAAAAGGGATGGTTTTCAGGATATGGGGTTGGTGAAATTTGGATCTGGTAGTGTGAATTTTTCGAAAGCTAAGTCTAGGAGCTTTTGTGAGAGTAAATGTTTGGGATCTTGTGAGTGTGTTGGGTTAACTTTTAGTGAAGGGAGTGGTTTGTGTAAGAACTTTTATGGTTCAGTGTTTGATTTTCAGAATGTGAGTTCTGTTGGTCTTGGTGTTGGTGATGGTGGTGGTGCCTTGTATGTGAGGGTGCCAAGAGATGGGAATGAGAAGGGTTTGGATAGTAAAGTTTTGATTGTTGCTGTCCTTGTTGGGTCGGTGGCAGTTTTGGGTGTTGTGGTGGTGACTTTGTTGGTGTTGGTGAAGAAGAAGAGGAAGAAGGAGTTGGAGGAGGAAGATAGATTTATTCAAATGTTGAATTTGAGGATGTTTTCTTACAAGGAGCTTCAATTGGCAACAAGGGGTTTTTCGGAGAAAGTTGGGCATGGTGGATTTGGGACTGTATTTCAAGGTGAATTGAGTGATTCAACTCTTGTTGCTGTGAAGAGGTTGGAGAGGCCAGGGAGTGGGGAGAAAGAGTTCAGGGCCGAGGTTTCGACAATTGGGAACATTCAGCATGTTAATCTTGTGAGGCTTAGAGGCTTTTGTTCTGAGAATGCTCATAGGCTTTTGGTTTATGAGTTCATGCAAAATGGCGCATTGAGCGCTTATCTGCGCAGGGAAGGGCCTAGTTTGAGCTGGGATGTTAGATTTCGAGTTGCAGTTGGAACAGCCAAAGGGATTGCATATTTACATGAGGAGTGTAGGAACTGCATTATACATTGTGATATCAAACCTGAGAATATCCTTTTGGATAGTGGTTTCAATGCAAAGGTTTCGGATTTCGGTTTGGCAAAGCTCATGGGGAGGGATTTCAGTAGGGTGTTGGCAACCATGAGGGGTACTTGGGGGTATGTTGCTCCGGAGTGGATTTCCGGGGTGGCAATTACTGCGAAGGCTGATGTTTATAGTTATGGAATGACATTGCTTGAACTAATTGGTGGTCGCCGAAACATTGAGACACTGCCATCTGCTGGTGGTTGTGACAGAGGCAAAGAGAGTGGTTGTGAGATGGGAGAGAGATGGTTCTTTCCTCCTTGGGCGGCACGGCAGATAATCGACGGCAATGTGGCCTCCGTGATCGATAAGAAACTTGGAGATGCATATAACATTGAGGAGGCTAGAAGGGTTAGTTTGGTAGCAGTTTGGTGCATTCAAGATGATGAAGCTATTAGGCCTACAATGGATATGGTGGTGAAAATGTTGAAAGGGTTAGTGGAAATTAGGGATCCTCCACTGCCGAATTTGCTACAAGCATTGGTTACCGGCGAGTCCTTTCAAGGCGTCAAGTCTGATTCAGGCAATGAGATTTCCACCGGCGGAGGCTTATCCGGCGGCAACTTGGAAGTGTCAATTGCTGATTCAGAATCATATGTTGGAGATGCATTTCCCTCCCCAATGGATGTGATTTACTTCCTAAGGAGATGA 2424 0.4649 MPLSYTLFFFFFLQRILTFTIATSSTTIILEGSTTLRSPNNTFELGIFNLPSSNNFYLAIRYASLSKQTLIWVANRRQPSPTQTNTTLQLTNTTTTCHLSLTHPQTSLPLWQTPTPKGPSFSSCNVQLLENGNLVLLSSENGTVLWQSFDEPTDKWLPGMNLTRTQSLVSWKTETDPSPGLYSLRLKPPDYGELELVFNGTDSYWSTGNWTGNFFTGIPEMTNPYIYRFHFEEPFTAAASFGFTETTSDSGFVPTMFGVCKGHESSELCVCVDGFGPSDEVGWGNGDYTMGCVRKKMDSCDKRDGFQDMGLVKFGSGSVNFSKAKSRSFCESKCLGSCECVGLTFSEGSGLCKNFYGSVFDFQNVSSVGLGVGDGGGALYVRVPRDGNEKGLDSKVLIVAVLVGSVAVLGVVVVTLLVLVKKKRKKELEEEDRFIQMLNLRMFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTLVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENAHRLLVYEFMQNGALSAYLRREGPSLSWDVRFRVAVGTAKGIAYLHEECRNCIIHCDIKPENILLDSGFNAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITAKADVYSYGMTLLELIGGRRNIETLPSAGGCDRGKESGCEMGERWFFPPWAARQIIDGNVASVIDKKLGDAYNIEEARRVSLVAVWCIQDDEAIRPTMDMVVKMLKGLVEIRDPPLPNLLQALVTGESFQGVKSDSGNEISTGGGLSGGNLEVSIADSESYVGDAFPSPMDVIYFLRR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00092 807 ProSitePatterns Protein kinases ATP-binding region signature. 459 481 IPR017441 GO:0005524
Aip02g00092 807 CDD STKc_IRAK 459 737 - -
Aip02g00092 807 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 9 251 - -
Aip02g00092 807 ProSiteProfiles Protein kinase domain profile. 453 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00092 807 CDD B_lectin 29 152 IPR001480 -
Aip02g00092 807 SMART serkin_6 453 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00092 807 Gene3D - 22 149 IPR036426 -
Aip02g00092 807 Gene3D Transferase(Phosphotransferase) domain 1 528 742 - -
Aip02g00092 807 ProSiteProfiles PAN/Apple domain profile. 300 366 IPR003609 -
Aip02g00092 807 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 256 793 - -
Aip02g00092 807 ProSiteProfiles Bulb-type lectin domain profile. 21 149 IPR001480 -
Aip02g00092 807 SUPERFAMILY Protein kinase-like (PK-like) 433 734 IPR011009 -
Aip02g00092 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 210 IPR036426 -
Aip02g00092 807 Pfam D-mannose binding lectin 69 167 IPR001480 -
Aip02g00092 807 Gene3D Phosphorylase Kinase; domain 1 415 527 - -
Aip02g00092 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 256 793 - -
Aip02g00092 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Aip02g00092 807 PIRSF SRK 1 257 IPR024171 GO:0004674
Aip02g00092 807 PIRSF SRK 243 789 IPR024171 GO:0004674
Aip02g00092 807 Pfam Protein kinase domain 456 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00092 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 9 251 - -
Aip02g00092 807 SMART blect_4 27 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00092 Aip-Chr2 1608049 1610910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00092 443 744 Receptor kinase-like Gene Family AT5G20050 43.492 2.42e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip02g00092 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00092 - - gmx:100778917 1009.59