Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00076 ATGGCTGTGGTGAGTCCTATGAGTCCTGCTATGGCTACAACTCCACACCAGGTCTATCCCACCACGCCTCTTCGCGGAAGCGAGGTTCCATTGATCATGAGTGGCCTGAGAGAAGCTGCAGAGGCATCTAGTCCAAATGTGGTTGATGACATTATCCATGTTGCTGTGGCAAAAGATGTGAAAGATAGCAGGTTGAATCTGATTTGGGCAATACAGAATTCTGGAGGAAAGAGGATTTGCATCCTTTATGTTCATGTGCCAGCAGCTACAATCCCCATAATGGGTGCTAATTTTCCAGAAAGTGCAGCCGGAGAGCATCGAGTTCAAGAACATCGAGAAAATGAAGAGCAAGGCATGCGTAATATTCTGAATGACTATCTTCTTATCTGCAGAAGAATGGGGGTAGAGGCAGAGAAACTGCATATTGTTGATAAGGATTGCATTGAAAAAGGGATTGTAGAACTTATCTGCAAGCATAATATCAAGAAGCTTGTGATGGGAGCAGCTTCTGATAAGTACCATTCTAGGAGAATGACAGAGCTCAGGTCTAGGAAAGCCATTTATGTGAGAGAAAATGCTCCTGCTTATTGTCATATACAGTTCATCTGCAAAGGATACCTCATATACACAAGGAATCTCAGTTTGGATGGAGGTAATGTAGAGGTCAGGTCTCCTTTGGCACCTCAAACGCCTAGCCGTTCGCCTTCACTTGGACAACAATTATATCGCCGAGTAAGATCTGTTAATGAAAGAAATGGAGGGAGAATGTCACTTGCTTCTCCAATCAGGTTTCTCATGCAACCAAACAGGTTTGGTAGAGAAGGAACTTCTAATGGCTCAGATGTACTGTCTAGGCCAGCAAGTCCTTTGGTTTCATCAAGAAGTTCTGTTAATTTCATTAGTGAGCCAAGTGAGAATGCATCAGCCTTGAATTCGAGTAGTCCTAATGCGATTCAAGCATCTCCTAGCAGGCTGGATAGTGAAATGGATGAGACTCTCTATGATCAACTCCAACAGGCCATGGCTGAAGCTGAGAATGCAAGGCAGGATGCTTATCAAGAGAGTATTAGGCGTGGGAATGCTGAAAGGAATGCCATTGAAGCGATTCGCAGGGCTAAAGCAGCTGAAATGAAGTATGAAAAGGAGGTGAAATTGAGGAAAGAATTAGAGGAAGCAATAAAAAGAGAAAAGGAAGAAATAGATTGCATGAAAAGCCAAAGAGAGAAGCTTAATGAAGAACTCCAACATGCCTTGCACAAGAATTCATTGCTAGAAAGTAAAATTGCATCAACTCAACTTATGTTAGAGGAGTTAGATCAGAAGAACAAATCTGCTATGGACACATTAGAAAAGTACAAGCAAGAGCGCGAGGATTTGCAAACACAGCGCGATAATGCCTTGAAAGAAGCTGAGGAGTTGAGGAGAGAAAAACAAGGAGAGGCCTCAACCTCACATGTATTTCAACTCTTCTCAGAATTTTCTTTTGCTGAGATTAAAGAAGCTACCAATAACTTCAGTCCATCCCAAAAGATTGGAGAAGGTGGATATGGAAGTATATATAAAGGTATCCTTCGCCAAACCGAGGTAGCTGTGAAAATGTTAAGCCCTGACAGCAAGCAAGGACCTAAAGAGTTTCAACAGGAGGTTGAGGTACTAAGCAAGTTAAGGCATCCCAATCTGATCACACTAATAGGAACCTGCCCAGAATCTTGGACTCTTGTCTATGAGTATTTATCCAATGGAAGCCTAGAAGATCGTCTCAGCTGCGAGGATAACACACCTCCATTATCATGGCAAACTAGAATTCGCATTGCTGCAGAAGTGTGCTCTACTCTAGTGTGTCTCCATTCTAATAAACCTCACAGCATAGTTCATGGTGATTTAAAACCAGCCAACATTCTCCTTGATGCTAACCTTGTTAGCAAGCTAAGTGACTTTGGAATCTCAAGATTACTATCGTGTCGCGAGGATTCTACTACACAGTTTTGGATAACTGATCCAAAGGGAACTTTTGCATATATGGACCCTGAATTCTTTGCTTCAGGGGAACTTACACCAAAGTCAGATGTTTATTCTTTTGGAATCATATTACTAAAACTGTTGACTGGTAAACCAGCTGTGGGAATAGCAAAGGTAGTTGAATCTGCTTTAGTTGCTGGAAAGTTGAATTCTCTCTTGGATCCCTTGGCCGGAGACTGGCCATTAGCACTGGCCGAAAAGCTTGCTCGCTTGGCTTTGAGGTGTTGCGAAATGGAGCGAAGGAACCGGCCGGATCTTCATCTGGAAGTATGGAGAATACTTGAACCTATGAAGGCTTCTTTGAGTGGAGAAAACACATTAGGACTTGGTTCTCAAGAGCTTTGCCAACCCCCTCCTTATTTCATTTGTCCAATTTTCAAGGAAGTCATGCGAGATCCTCACATGGCAGCAGATGGTCATACTTATGAAGCCGAGGCCATACGAGGATGGCTGGACAGCGGCCGCGACACTTCGCCGGTGACAAATTCTAAGCTTGTAATGCACAATCTTGTTCCTAACCATGCTCTCCGCTATGCAATCCAAGACTGGCTTGAAAGCTGA 2580 0.4329 MAVVSPMSPAMATTPHQVYPTTPLRGSEVPLIMSGLREAAEASSPNVVDDIIHVAVAKDVKDSRLNLIWAIQNSGGKRICILYVHVPAATIPIMGANFPESAAGEHRVQEHRENEEQGMRNILNDYLLICRRMGVEAEKLHIVDKDCIEKGIVELICKHNIKKLVMGAASDKYHSRRMTELRSRKAIYVRENAPAYCHIQFICKGYLIYTRNLSLDGGNVEVRSPLAPQTPSRSPSLGQQLYRRVRSVNERNGGRMSLASPIRFLMQPNRFGREGTSNGSDVLSRPASPLVSSRSSVNFISEPSENASALNSSSPNAIQASPSRLDSEMDETLYDQLQQAMAEAENARQDAYQESIRRGNAERNAIEAIRRAKAAEMKYEKEVKLRKELEEAIKREKEEIDCMKSQREKLNEELQHALHKNSLLESKIASTQLMLEELDQKNKSAMDTLEKYKQEREDLQTQRDNALKEAEELRREKQGEASTSHVFQLFSEFSFAEIKEATNNFSPSQKIGEGGYGSIYKGILRQTEVAVKMLSPDSKQGPKEFQQEVEVLSKLRHPNLITLIGTCPESWTLVYEYLSNGSLEDRLSCEDNTPPLSWQTRIRIAAEVCSTLVCLHSNKPHSIVHGDLKPANILLDANLVSKLSDFGISRLLSCREDSTTQFWITDPKGTFAYMDPEFFASGELTPKSDVYSFGIILLKLLTGKPAVGIAKVVESALVAGKLNSLLDPLAGDWPLALAEKLARLALRCCEMERRNRPDLHLEVWRILEPMKASLSGENTLGLGSQELCQPPPYFICPIFKEVMRDPHMAADGHTYEAEAIRGWLDSGRDTSPVTNSKLVMHNLVPNHALRYAIQDWLES 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00076 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Aip02g00076 859 SMART serkin_6 505 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00076 859 PANTHER U-BOX KINASE FAMILY PROTEIN 41 858 - -
Aip02g00076 859 ProSitePatterns Protein kinases ATP-binding region signature. 511 532 IPR017441 GO:0005524
Aip02g00076 859 CDD STKc_IRAK 511 770 - -
Aip02g00076 859 CDD RING-Ubox_WDSUB1_like 794 835 - -
Aip02g00076 859 PANTHER OS02G0152300 PROTEIN 41 858 - -
Aip02g00076 859 SMART Ubox_2 793 856 IPR003613 GO:0004842|GO:0016567
Aip02g00076 859 MobiDBLite consensus disorder prediction 269 289 - -
Aip02g00076 859 Coils Coil 327 354 - -
Aip02g00076 859 MobiDBLite consensus disorder prediction 271 289 - -
Aip02g00076 859 MobiDBLite consensus disorder prediction 456 478 - -
Aip02g00076 859 Gene3D Phosphorylase Kinase; domain 1 490 577 - -
Aip02g00076 859 ProSiteProfiles U-box domain profile. 789 859 IPR003613 GO:0004842|GO:0016567
Aip02g00076 859 CDD STK_N 51 205 - -
Aip02g00076 859 Pfam Protein kinase domain 507 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g00076 859 SUPERFAMILY Protein kinase-like (PK-like) 483 759 IPR011009 -
Aip02g00076 859 Pfam U-box domain 791 858 IPR003613 GO:0004842|GO:0016567
Aip02g00076 859 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 789 859 IPR013083 -
Aip02g00076 859 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Aip02g00076 859 SUPERFAMILY RING/U-box 785 858 - -
Aip02g00076 859 Coils Coil 372 483 - -
Aip02g00076 859 ProSiteProfiles Protein kinase domain profile. 505 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00076 Aip-Chr2 1427886 1432714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00076 47 858 U-box Gene Family AT2G45910 53.497 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aip02g00076 Pkinase 6.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00076 - - adu:107472426 1587.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00076 02 1427886 1432714 Aip02g00076 02 1427886 1432714 ECH
Aip02g00076 02 1427886 1432714 Aip04g02801 04 119045353 119050598 ECH