Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00069 ATGGCTTCTTCTTGGAGTCCAAAGCATGAGAAGATGCAGAAGAGTTTGAGTACACAGTTAGCTGTGGCAGTAAGAAGTGTTCAATGGAGTTATGGAATTTTCTGGGCACCTTCAACAACCCAAGAAGGAGTGCTGGAATGGAGGGAAGGGTACTACAATGGAGACATTAAGACAATGAAGACAGTGCAAACAACAATGGAGATCAAGAATGACAAAATTGGAGTTCAGAGGAGTGAGCAGCTGAAGGAACTGTACAAGTTCCTTCTTGTTGGTGAATCTGATCCACAAACAAAAAGGCCTTCAGCTGCATTGTCTCCTGAGGATCTTTCAGATTCTGAGTGGTATTATTTGGTTTGCATGTCCTTTGTGTTCTATCCTAATCAAAGTTTGCCTGGTAGAGCACTAGAAATCGGCGAAACGATATGGTTATGCAATGCTCAATATGCAGATAGTAAAGTTTTCTCTCGTTCTTTACTTGCAAAGAGTGCATCAATTCAGACTGTAGTGTGCTTTCCCTATCTAGGGGGTGTTATTGAGATTGGTACAACTGAACTGGTGCTAGAGGACCCTAATCTTATTCAACATGTGAAGGCTTGTCTCTTGGAATTCTCAAAGCCTATTTGCTCTGATAAATCTTCATCAGCACTCAATAAGCCTGATGATGACAAACTTCAACCATGCTCCAATGGTGAACATGTTTTGGTTGACACAAAGGTTTTGGAGTACTCATGTTCCCCAGCTGAAGAAATCAAGCTTGATCAAGATCCTATCAAGGAACTACAACAAGATTCCAACATGGATTCTCCTGATGGATGTTCTAATGGTTGCGAGCACAACTGCCGTGTTGGAGAATCGATGGTTGAGGGAATCAATAATGGAGGGCCTTCTTCTCAAGTTCATTTCATGGATGATGATGATGCCTTGAGCAATGGTGCACCTGATTCCCTGAGTTCTTGTGATTGTATATCCGAGGCATCCGAGAACCGGGGAAAGGCTTCAAAGGATGTTCAACTAATCAGGGGAATTCAAAGCTTCAATCATTTGAATAGAAGTTCATTGGATGCAGAAGCAACTGATGAACACTTAAGCTACACAAGAATACTCTCTGCTCTTCTTGGGAGATCGTCGGCTTTCAAGCAGAATCCGTATGCTAGTAACTCAAATTGCAAATCGAGTTTCGTGAAATGGAAGAAAGGAGGAATCTGTGAGCAAAATCGGCTGCGGTTGGAGCAAAGCTTGTTGAAGAAGACTCTGTTTACTGTCCCTCTTATGCATAGGAGTTTCTCATCTATCGAATCAATGAAAGAAAATGAGACAAAAGAATGGACTAATAGATTGGAAAATGCTGATGACAAGTTCAGGGAAAATGTCTTATCTGATAAAATAAGAGAAACTGGAAACTTTAAGATTCTCAAGTCTTCAATTCCTCATCCTATAAGTGAGGTGGAGAAGATTTCGATCCTAGGCGACACAATTAAGTACTTGAAAGAGCTTGAGACAAGAGTGGAAGAACTAGAATCTTACATGGACATGTCGGATTCAGAAGCAAGAACCAAAAGAAAATGTCCAGATATGCTAGAGCAGATATCAGATAACTATGGAGCCAGAAAGGTTTACAATAAGGGAATGAGGAAGCCCTGGATGATGAACAAGAGAAAGGCTTGTGACATTGATGAAAAAGACAGAGAAGAAATAGACAGATTTGTTGTGTCTGAAGAAGATAATAATAAGCCATTGGATGTGAAGGTTAACATGAAGGAGCAAGAGGTTTTGATTGAGATGAAATGTCCTTATAGAGAATATATATTGCATGATATCATGGATGCTATTAACAATCTGCATTTGGATGCTCACTCAGTTGAGTCATCAACAACTGAAGGTGTTCTTACATTGACACTTAAATCCAAGTTTCGAGGCACAGCGACTGCGCCGCTGGGGATGATCAAAGAAGCACTCTGGAAAGTGTCTGGAAATCTATGA 1980 0.4071 MASSWSPKHEKMQKSLSTQLAVAVRSVQWSYGIFWAPSTTQEGVLEWREGYYNGDIKTMKTVQTTMEIKNDKIGVQRSEQLKELYKFLLVGESDPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQSLPGRALEIGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVLEDPNLIQHVKACLLEFSKPICSDKSSSALNKPDDDKLQPCSNGEHVLVDTKVLEYSCSPAEEIKLDQDPIKELQQDSNMDSPDGCSNGCEHNCRVGESMVEGINNGGPSSQVHFMDDDDALSNGAPDSLSSCDCISEASENRGKASKDVQLIRGIQSFNHLNRSSLDAEATDEHLSYTRILSALLGRSSAFKQNPYASNSNCKSSFVKWKKGGICEQNRLRLEQSLLKKTLFTVPLMHRSFSSIESMKENETKEWTNRLENADDKFRENVLSDKIRETGNFKILKSSIPHPISEVEKISILGDTIKYLKELETRVEELESYMDMSDSEARTKRKCPDMLEQISDNYGARKVYNKGMRKPWMMNKRKACDIDEKDREEIDRFVVSEEDNNKPLDVKVNMKEQEVLIEMKCPYREYILHDIMDAINNLHLDAHSVESSTTEGVLTLTLKSKFRGTATAPLGMIKEALWKVSGNL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00069 659 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 467 512 IPR036638 GO:0046983
Aip02g00069 659 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 16 199 IPR025610 -
Aip02g00069 659 Gene3D - 460 529 IPR036638 GO:0046983
Aip02g00069 659 PANTHER TRANSCRIPTION FACTOR TT8 8 657 - -
Aip02g00069 659 PANTHER TRANSCRIPTION FACTOR MYC1 8 657 - -
Aip02g00069 659 Coils Coil 495 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00069 Aip-Chr2 1338978 1343021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00069 15 656 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.275 1.25e-127 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00069 - - adu:107472380 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00069 02 1338978 1343021 Aip02g00069 02 1338978 1343021 ECH