Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00054 ATGGATCGTGGGGACCAAATGGCGTTGTCTGGTTCTGCATCTTATTATATGCAGAGAGGAATGCCTGGTTCTGGAACACAGCAACCTGACTTGCACAATTCGCCTAGTATGCGTCCATTGTCGAATCCTAACCTCCCATTTCAGCAAACCATTGGGGGTAGTACCATTGGATCCACGATGCCATTGGAATCTTCGGGGATGTCGTCTCAATGTGTCAATGTTGGTGCCCCTGCTGGAGCTCCTTCCGGAGAACCGGTCAAAAGGAAGAGGGGTAGGCCTAGGAAGTATGGGCCGGATGGAACCGTTTCACTGGCATTGACTCCAACGCCAGCTACTCATCCAGGAACCATGACACAACAAGGCCAGAAACGGGGTAGAGGTCGCCCCCCAGGGTCTGGGAAGAAACAGCAGCTGGCTTCTCTTGGTAAATATCTGTTTCAACTTTTATGA 450 0.5111 MDRGDQMALSGSASYYMQRGMPGSGTQQPDLHNSPSMRPLSNPNLPFQQTIGGSTIGSTMPLESSGMSSQCVNVGAPAGAPSGEPVKRKRGRPRKYGPDGTVSLALTPTPATHPGTMTQQGQKRGRGRPPGSGKKQQLASLGKYLFQLL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00054 149 MobiDBLite consensus disorder prediction 1 139 - -
Aip02g00054 149 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Aip02g00054 149 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Aip02g00054 149 MobiDBLite consensus disorder prediction 11 72 - -
Aip02g00054 149 MobiDBLite consensus disorder prediction 105 125 - -
Aip02g00054 149 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 5 142 IPR039605 GO:0003680
Aip02g00054 149 PANTHER BNAA07G38060D PROTEIN 5 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00054 Aip-Chr2 1223231 1223680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00054 1 145 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 45.912 6.30e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00054 - - gmx:100799791 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00054 02 1223231 1223680 Aip02g00054 02 1223231 1223680 ECH
Aip04g02758 04 117756659 117761283 Aip02g00054 02 1223231 1223680 PCT