Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00040 ATGGTGGTGGATCGTTTCGATTCTTGCATTGCTTTTGGTGGGAAGGGTTTTGGTTGTGCTTTTCTCGGGAACTCAAGAACTATCCTGAAAGCGCGGTTTAGCGGCATGAACAAGATTGGTATTGCTGCTGCATGTAGTAGTAGTAGTAGTAGTTGGAGGAGTAATAATTCAAGATTGGCTTGTGTAGGAGAGTTCAACTTTTCAAATGTGAAGAGAATAGGGAAACTTTGTGGCAACAGTTCTAATTTTCGCGTTGTGGGAGGTAGGGGATTTTTGTCTAGGTGCCAGGGTGATGATGATTCTTTAGCATATATTAATGGCAATGGCCGGAATATTGATAATGCTGGAGGTGGTCCAAACAAGGTGGGTTCTGATTTGGGTTCCATTTCAGGAGCTGCATCGAGTGAACCCTTGGAAGACGAAAGAACAATTGGGGGTGAAATAAAGCAAGAGGTACAGACAGTGGATGAATTGAAAGAACTGTTGCAAAAGGCCTTGAAGGAACTCGAAGTTGCTAGGCATAATAGTGCCATGTATGAGGAGAGGGTCAAGAAGATATCGGAGAGTGCGATTTCCTTTCAGGATGAAGCATCAAGAGCATGGAATGATGTTAATTCTACTCTTGATATCATCCAGGAAATTGTGGGTGAAGAATTTGTTGCCAAGGAAGCTGTTCAGAAAGCGACTATGGCTCTTTCTTTTGCCGAGGCTAGGCTTCAAGTAGCCATGGAGTCTTTGGAGGTTGTAAAAGGAACTTATGATCCTCGGTCACAAGGTGCCAAAGAGAGTAATGGCGATGAAGATATATTGGAAGAGGAGCAATTGCTTGTGGTTGCTCAAGAAGATATCAAGGAGTGTCAGTCAAATTTAGCGAATTGCGAGACAGAGCTAAGGTGCTTGCAAAAAAGAAAGGAGAATTTGCAGAATGAAGTGAACAAGTTGCATGAAATTGCGGAAAAGGCCCAGACGAATGCAGTAAAAGCCGAGGAGGACGTCACAAACATAATGCTTTTAGCTGAGCAAGCTGTTGCTGATGAACTTAAGGCTGCACAAGTCGTAAATGATGCAGAGATTGCATTATCGAAAGCAGATAAGTCTTCCTCTAGCATTATTGCTGACTCTGGTATCACTCTACAAGAACAAGAGGTTTTGGACGATCCTAAGGAGGAGGTGGTTCAAAATGTTTCTGGTGATGACACTGTTGATACAGACACAGATTCCCAAATTGACAATGAAACTTTGCTTGGCAAGCAATCATCAGACAAGTTTTCTGATAAAACCAGCCAAATTATTGAAGATACGGCACAGTCTGATTATCTGAGTGATCATGAAAATGGACAGTTAGTCTTAGACCCATCTAAAGAAGCTGAAGTTGAAGTAGAGAAAATAATGAATTCAGTTCAAATGAAAAAACAGGAAACACAGAAAGATGTAAGAGACAATCCACCACTTGTTCCCAAGGCATTGTTGAATAAATCTTCCAGATTTTTTCCTGCATCATTCTTCTCTTTTACTATCGAAGGTGATGATTATACACCAGAATCATTTTTCCAAAGTTTCGTGGAGTCAGCACGGAAGCTGTTACCCAAGCTAGTTATTGGGATATTGTTACTTGGAGGGATTGCCTTCTATGCAAACAGAGCAGAGAGGGGTGCGCAATTACTTCAGCAACCAGGAGTAATTACAACCACTGCTGAAGAAGTTTCCACAAGTGCAAAACCTTTGGTTAGACAGCTTCAGAATCTCCCCACGAGGATCAAGAATATTATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCATCCCTTTTTGATATGCTTTGGTTATTACTTGCTAGTGTTATTTTTGTGCCAGTGTTTCAGAAAATCCCTGGAGGCAGTCCCGTTCTTGGCTACTTGGCTGCTGGTATCCTTATTGGGCCCTATGGTCTGTCCATCATTCGTCATGTTCATGGGACGAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTTGAGCTCTCTTTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAGCTCAGGTTTTGGTGACTGCTGTTGTTGTTGGCCTAGTAGCTCATTATGTTTGTGGTCAAGCAGGTCCTGCTGCTATTGTCATTGGGAATGGCCTCGCATTATCATCAACCGCTGTTGTTCTGCAAGTATTACAGGAGAGAGGTGAGAGCACATCACGCCATGGACGAGCCACATTTTCTGTGTTACTTTTTCAGGACTTGGCGGTTGTGGTCTTGCTAATTCTCATACCTCTTATTTCACCAAATTCATCTAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGTCATTATTGCAGGTGGACGATTGCTACTTCGACCAATATATAGGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACAAGTCTTCTCACAGCCAGGGCAGGGCTTTCCATGGCACTAGGAGCATTTTTGGCTGGTTTACTACTAGCTGAAACTGAATTTTCCTTACAAGTGGAATCTGACATTGCTCCATATCGTGGTCTTCTGTTAGGTCTGTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAAATTTAAAGTCATTATGGGGACGCTGGCACTCTTACTATGTGGCAAGACACTGTTGATTACTGTGATTGGTAGAATTTTCGGTATTTCACTCATTAATGCCATAAGAGTTGGCCTCCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCCTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCCTCTCTGCTGTTTCTTCTTGTGGGAATTTCAATGGCCCTCACACCATGGCTAGCTGAAGGAGGACAGATGATTGCTTCCCGTTTTGAGCTACATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGACGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCGGAGCGACTTATTCCTTTTGTTGCACTAGACGTCAGAAGTGATAGAGTGGCAATTGGGCGTGCCCTGGATCTCCCAGTGTACTTCGGAGATGCTGGTAGCCGAGAGGTCCTACATAAGGTCGGGGCTGAAAGGGCGAGCGCTGCTGCAGTAACTCTAGATTCTCCTGGTGCAAATTATAGAACAGTTTGGGCTTTAAGCAAGCACTTCCCGAAAGTAAAGACCTTCGTCCGTGCTCATGATGTTGATCATGGATTGAACTTAGAAAAGGCTGGAGCCACTGCTGTAATATTCTGA 3387 0.4284 MVVDRFDSCIAFGGKGFGCAFLGNSRTILKARFSGMNKIGIAAACSSSSSSWRSNNSRLACVGEFNFSNVKRIGKLCGNSSNFRVVGGRGFLSRCQGDDDSLAYINGNGRNIDNAGGGPNKVGSDLGSISGAASSEPLEDERTIGGEIKQEVQTVDELKELLQKALKELEVARHNSAMYEERVKKISESAISFQDEASRAWNDVNSTLDIIQEIVGEEFVAKEAVQKATMALSFAEARLQVAMESLEVVKGTYDPRSQGAKESNGDEDILEEEQLLVVAQEDIKECQSNLANCETELRCLQKRKENLQNEVNKLHEIAEKAQTNAVKAEEDVTNIMLLAEQAVADELKAAQVVNDAEIALSKADKSSSSIIADSGITLQEQEVLDDPKEEVVQNVSGDDTVDTDTDSQIDNETLLGKQSSDKFSDKTSQIIEDTAQSDYLSDHENGQLVLDPSKEAEVEVEKIMNSVQMKKQETQKDVRDNPPLVPKALLNKSSRFFPASFFSFTIEGDDYTPESFFQSFVESARKLLPKLVIGILLLGGIAFYANRAERGAQLLQQPGVITTTAEEVSTSAKPLVRQLQNLPTRIKNIIASLPDQEVDEEEASLFDMLWLLLASVIFVPVFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSFERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITVIIAGGRLLLRPIYRQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSKFKVIMGTLALLLCGKTLLITVIGRIFGISLINAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLLVGISMALTPWLAEGGQMIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPKVKTFVRAHDVDHGLNLEKAGATAVIF 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00040 1128 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 18 1127 - -
Aip02g00040 1128 Coils Coil 148 182 - -
Aip02g00040 1128 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1010 1127 IPR036291 -
Aip02g00040 1128 Pfam Sodium/hydrogen exchanger family 610 981 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip02g00040 1128 Gene3D - 601 988 IPR038770 -
Aip02g00040 1128 MobiDBLite consensus disorder prediction 396 421 - -
Aip02g00040 1128 Gene3D - 1009 1128 - -
Aip02g00040 1128 Coils Coil 453 473 - -
Aip02g00040 1128 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 18 1127 - -
Aip02g00040 1128 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 612 892 IPR004771 GO:0006812|GO:0008324|GO:0016021
Aip02g00040 1128 MobiDBLite consensus disorder prediction 114 140 - -
Aip02g00040 1128 MobiDBLite consensus disorder prediction 394 421 - -
Aip02g00040 1128 Pfam TrkA-N domain 1014 1127 IPR003148 GO:0006813
Aip02g00040 1128 Coils Coil 269 331 - -
Aip02g00040 1128 ProSiteProfiles RCK N-terminal domain profile. 1013 1128 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00040 Aip-Chr2 1107957 1116226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00040 90 1127 Inorganic Solute Cotransporters AT4G00630 67.395 0.0 1268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00040 - - adu:107460050 1979.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00040 02 1107957 1116226 Aip02g00040 02 1107957 1116226 ECH
Aip04g02732 04 117015362 117025899 Aip02g00040 02 1107957 1116226 PCT