Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00029 ATGATTCAACATTATTTCCCCGTGATCCAAACCACAAGCTGCAAATCCACCATATCCTCTCTCATCCTCTCCTCTTTCTCCAATGAAACCACCACAAACAAGAACAAGAGTACATTCAGGGGACTTGGTTGTGCTGCTGCTTCTGCATCATCACAACAAGTCTCAGTTCCTGCTGCGATTCGATCCTCTGCTGATTGGAAGAACACTAGGAAGAACAAGAAGTGCAGAAGGAGGAACACCGAAAAAAGCAGCATAACATGTGACCATAAACATGCTTCTTCTTCTTTTTCTTCTTCTTTTCAGGATGTATGGTGTGGCCCTGGAATTGGATTCGCATCAGATCATGCTTCTGCTTCTGTGAATTGTGTGGTGGCAAGGAAGAATGCTTCTTCAAGAAGGAGCCTTGATGCTGTTGAGAGAGCAACACATAGGGAAAAGAATAAATGTTATTCTATTTGGATACGTAATGCAAATATTTTTTACTTTGTGTTATCAACAGTTGTTGTGGCAATTGCAGTTGCAAATCCAACTGATCTTGTGAAAGTTAGACTACAAGCAGAAGGAAAATTGCCAGTTATATTAGAAAAGTTAAGAGTTGTAGAGGAAAAACGCCAAGAAGTGGAGGCCAGAGCTAGGGAGCTTGATAAACAGGTTGCTTCTCTTAGAGAAGGTGTATCCCTAGAAACCAAACTTCTGAGTAGTCAAGGGACATGTATTTCCTGCAAAAGCTTCTGA 735 0.4136 MIQHYFPVIQTTSCKSTISSLILSSFSNETTTNKNKSTFRGLGCAAASASSQQVSVPAAIRSSADWKNTRKNKKCRRRNTEKSSITCDHKHASSSFSSSFQDVWCGPGIGFASDHASASVNCVVARKNASSRRSLDAVERATHREKNKCYSIWIRNANIFYFVLSTVVVAIAVANPTDLVKVRLQAEGKLPVILEKLRVVEEKRQEVEARARELDKQVASLREGVSLETKLLSSQGTCISCKSF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00029 244 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 7 167 IPR045191 GO:0061630
Aip02g00029 244 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 7 167 - -
Aip02g00029 244 Coils Coil 197 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00029 Aip-Chr2 868871 871334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00029 7 137 C3H Transcription Factor Family AT1G73760 38.255 3.34e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00029 - - ahf:112751066 204.142