Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00024 ATGCCCCCGGCATCTCCATCGCCGTCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGTGCATTCCACCTGCGGCACTTCTCGTCGGGCAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAGCATCGGGATCTCTGCTCACATCGACTCCGGCAAGACAACTTTGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGCAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGAGGGAGAAAGGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATCACGGTTCCTCGCTTAGTTAGGATGCATTCTGATGAGATGGAGGAGAGACTTTTACCGATGGATCAGTTAAATACACAATGA 567 0.5362 MPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRSIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVPRLVRMHSDEMEERLLPMDQLNTQ 188
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00024 188 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 96 111 IPR031157 -
Aip02g00024 188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 171 IPR027417 -
Aip02g00024 188 Gene3D - 60 164 IPR027417 -
Aip02g00024 188 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 50 188 IPR000795 GO:0003924|GO:0005525
Aip02g00024 188 Pfam Elongation factor Tu GTP binding domain 51 170 IPR000795 GO:0003924|GO:0005525
Aip02g00024 188 Gene3D - 53 147 IPR027417 -
Aip02g00024 188 PRINTS GTP-binding elongation factor signature 139 150 IPR000795 GO:0003924|GO:0005525
Aip02g00024 188 PRINTS GTP-binding elongation factor signature 123 133 IPR000795 GO:0003924|GO:0005525
Aip02g00024 188 PRINTS GTP-binding elongation factor signature 54 67 IPR000795 GO:0003924|GO:0005525
Aip02g00024 188 PRINTS GTP-binding elongation factor signature 103 111 IPR000795 GO:0003924|GO:0005525
Aip02g00024 188 TIGRFAM small_GTP: small GTP-binding protein domain 53 168 IPR005225 GO:0005525
Aip02g00024 188 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 4 170 IPR045044 -
Aip02g00024 188 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 4 170 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip02g00024 Aip-Chr2 638812 642986 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00024 51 183 Eukaryotic Initiation Factors Gene Family AT3G22980 35.862 1.67e-18 80.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00024 K02355 - gmx:100796646 285.034