Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip02g00021 | ATGGCAATGGCAATGGCCATGACCTCATCCATAATGTTATCAACAACTTGTTCTTTCAGTTTCCCTTCTATCACTATATGCATTTCCTCTTACAACCCTAACCCTTCTAGAAGACTAGCTCTCTTTCACCTTCTTTCTGGTCCTTTTGCTATTCCACAGTCCCAATCTCTGTTATTTGGTGTAAAAGGTTCAGAATTGTTTAGAGTAGCAAAGGCTAATACAGCAGAGAATCTAATTCAACCAGAGCAAAACTTGTTTGAATGGGTCAAAAATGACAATAGAAGATTCTTACATGTTGTGTACTGTGTTGGGGACTTGGATAAGACTATAAAGTTTTACACTAAGTGCCTTGGCATGAAGCTGTTGAGAAAACGTGATATACCTGAAGAAAGATACACAAATCCTTTTCTTGGATATGGCCCTGAAGATTCCAATTTTACAGTTGAGCTTACCTACAATTATGGAGTGGACAAGTATGACATTGGAAATGAGTTTGGTCATTTGGGTGTTGTAGTTGAAGATGCTGCCAAGGCAGTTGATCTGATAAAAGCAAAAGGTGGAAAGGTTATCAAGGAACCAGGGCCTGTCAAAGGTGGCAGCACAGTAACTTCTTGCATCCAAGATCCTGATGGCGATCTTGACCGTGCCATAATCTTCTATCAGAAAGCTATTGGCATGAAACTTCTGCATAGGAAAGACAATCCTGAGCACAAGATTGCAATAGGCACAAATGATGTGTATAAGAGTGCAGAAGCAATCAAACTGTGTGGAGGCAAGATTATCCATGAACCTGGGCCGCTGCCAGGTATCAACACCAAGATAGCAGTTTGCTTGGACCCTGATGGTTGGAAATTGACCAGAACGGCAGCCACTTCTTTCTCTAGCATCCCTCTGATCTCTTTATTGTACACCGTTACTATTGCTGTTGAGGCTGCAACCTTTGAGCTCGATGCCGATCTGCTCACTTCTCATCTCTTCGCTGTTGCTGTGCTCTCTACTCTGTATTCCCTCTCCAACTTTTTGCTTTCTCTACGCATACCGCCGCTATTCTATCCACTAGCAGCCTCCGCCGCCGCCTGCAAACTCTGCTGCCAGCACTGCAACAAATGTCTCCTTACTTCAGAAAATTAG | 1131 | 0.4297 | MAMAMAMTSSIMLSTTCSFSFPSITICISSYNPNPSRRLALFHLLSGPFAIPQSQSLLFGVKGSELFRVAKANTAENLIQPEQNLFEWVKNDNRRFLHVVYCVGDLDKTIKFYTKCLGMKLLRKRDIPEERYTNPFLGYGPEDSNFTVELTYNYGVDKYDIGNEFGHLGVVVEDAAKAVDLIKAKGGKVIKEPGPVKGGSTVTSCIQDPDGDLDRAIIFYQKAIGMKLLHRKDNPEHKIAIGTNDVYKSAEAIKLCGGKIIHEPGPLPGINTKIAVCLDPDGWKLTRTAATSFSSIPLISLLYTVTIAVEAATFELDADLLTSHLFAVAVLSTLYSLSNFLLSLRIPPLFYPLAASAAACKLCCQHCNKCLLTSEN | 376 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip02g00021 | 376 | PANTHER | LACTOYLGLUTATHIONE LYASE | 20 | 211 | - | - | |
| Aip02g00021 | 376 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 96 | 211 | IPR004360 | - | |
| Aip02g00021 | 376 | Gene3D | - | 232 | 296 | IPR029068 | - | |
| Aip02g00021 | 376 | ProSitePatterns | Glyoxalase I signature 1. | 98 | 119 | IPR018146 | GO:0004462|GO:0046872 | |
| Aip02g00021 | 376 | PANTHER | LACTOYLGLUTATHIONE LYASE | 211 | 239 | - | - | |
| Aip02g00021 | 376 | PANTHER | LACTOYLGLUTATHIONE LYASE | 238 | 285 | - | - | |
| Aip02g00021 | 376 | PANTHER | LACTOYLGLUTATHIONE LYASE | 20 | 211 | - | - | |
| Aip02g00021 | 376 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 95 | 219 | IPR037523 | - | |
| Aip02g00021 | 376 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 212 | 286 | IPR029068 | - | |
| Aip02g00021 | 376 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 94 | 231 | IPR029068 | - | |
| Aip02g00021 | 376 | Gene3D | - | 67 | 211 | IPR029068 | - | |
| Aip02g00021 | 376 | PANTHER | LACTOYLGLUTATHIONE LYASE | 211 | 239 | - | - | |
| Aip02g00021 | 376 | PANTHER | LACTOYLGLUTATHIONE LYASE | 238 | 285 | - | - | |
| Aip02g00021 | 376 | TIGRFAM | glyox_I: lactoylglutathione lyase | 84 | 211 | IPR004361 | GO:0004462|GO:0046872 | |
| Aip02g00021 | 376 | CDD | GlxI_Ni | 97 | 211 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip02g00021 | Aip-Chr2 | 625227 | 629857 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip02g00021 | 98 | 211 | Calmodulin-binding Proteins | AT1G08110 | 29.496 | 5.49e-11 | 60.5 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip02g00021 | K01759 | - | gmx:100810908 | 378.252 |