LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g00017	ATGGCACGGATAGCCAGGTCCTCTGCGCCGCGCCTGCTCTACACCTTCTTCTCCTCCTCCGTGCCCCCGGCATCCCCATCGCCGTCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGTGCATTCCACCTGCGGCACTTCTCGTCGGGCAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAGCATCGGGATCTCTGCTCACATCGACTCCGGCAAGACAACTTCGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGCAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGAGGGAGAAAGGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCACATTGATTTCACCATTGAAGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAGTCGGTCCATCACGGTAGATTGA	558	0.5663	MARIARSSAPRLLYTFFSSSVPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRSIGISAHIDSGKTTSTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHIDFTIEVERALRVLDGAILVLCSVGGVQSRSITVD	185

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g00017	185	Gene3D	-	73	167	IPR027417	-
	Aip02g00017	185	PRINTS	GTP-binding elongation factor signature	123	131	IPR000795	GO:0003924\|GO:0005525
	Aip02g00017	185	PRINTS	GTP-binding elongation factor signature	159	170	IPR000795	GO:0003924\|GO:0005525
	Aip02g00017	185	PRINTS	GTP-binding elongation factor signature	74	87	IPR000795	GO:0003924\|GO:0005525
	Aip02g00017	185	PRINTS	GTP-binding elongation factor signature	143	153	IPR000795	GO:0003924\|GO:0005525
	Aip02g00017	185	ProSiteProfiles	Translational (tr)-type guanine nucleotide-binding (G) domain profile.	70	185	IPR000795	GO:0003924\|GO:0005525
	Aip02g00017	185	TIGRFAM	small_GTP: small GTP-binding protein domain	73	171	IPR005225	GO:0005525
	Aip02g00017	185	Pfam	Elongation factor Tu GTP binding domain	71	184	IPR000795	GO:0003924\|GO:0005525
	Aip02g00017	185	ProSitePatterns	Translational (tr)-type guanine nucleotide-binding (G) domain signature.	116	131	IPR031157	-
	Aip02g00017	185	Gene3D	-	80	183	IPR027417	-
	Aip02g00017	185	PANTHER	ELONGATION FACTOR G, MITOCHONDRIAL	1	185	-	-
	Aip02g00017	185	PANTHER	ELONGATION FACTOR G, MITOCHONDRIAL	1	185	IPR045044	-
	Aip02g00017	185	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	67	184	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g00017	Aip-Chr2	386438	387701	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g00017	71	184	Eukaryotic Initiation Factors Gene Family	AT3G22980	35.965	1.18e-16	75.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g00017	K02355		-	gmx:100796646	293.123