Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00013 GGTTTCCGCACCAGTAAGCCCCCACAAAACCACAAACCAAACGACAAACCCTGCGCCACCTCTTCCACCACCATCATGGCACGGATAGCCAGGTCCTCTGCGCCGCGCCTGCTCTACACCTTCTTCTCCTCCTCCGTGCCCCCGGCATCTCCATCGCCGTCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGTGCATTCCACCTGCGGCACTTCTCGTCGGGCAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAACATCGGGATCTCTGCTCACATCGACTCTGGCAAGACAACTTTGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGCAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGAGGGAGAAAGGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGTTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATCACGGGAGTACAGCCACTTCTGGATGGTGTACTTAATTATTTGCCATGTCCAATTGAAGTTAGTAGTTATGCCCTTGACCAAACAAAGAATGAGGAAAAGGTTGAGTTGACTGGAAGTCTTGATGGGCCACTTGTAGCGTTGGCATTTAAGTTGGAGGAAGGGCGGTTTGGCCAGTTGACATATTTAAGAATTTACGAGGGTGTGATCCGCAAGGGCGAGTTTATTATTAATGTAAACACCGGCAAGAAGATCAAGGTTCCTCACTTAGTTAGGATGCATTCTGATGAGATGGAGGTTAGGTATATTGAACCACTTCGGGCAGGATCACCAACTAAATTCGAATTTGAAAACCTCCTTGTTGGGCAAGCTATTCCATCAGGTTTTATCCCTGCAATTGAAAAAGGTTTTAAGGAAGCCGCCAACTCGGGGGCTTTAATTGGACATCCTGTCGAAAATCTTAGAGTTGTCTTGACAGATGGTGCTGCTCATGCCGTTGATTCTAGTGAACTTGCATTTAAGTTGGCTTCTATCTATGCTTTCAGACAGTGCTATACAGCTTCCAGGCCATTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAGAATTCCAAGGAGCTGTTGCTGGTGACATTAACAAGTGGGGAGAAGCTGATGGTGAGGGAGAAGCTAACGGCAAGGCTCGAAGCAAGAAGACGACAACGAAGACCAGTCCACCGGGACCTGTTGCCTCTATTACCGGCGACGAAGAGCGCAGGGAAGGGAGAGATCGAGACCAGGTGCAAGACAGAGACCGTGAGAAGCAAGAAGATGACCACCACCACTACCCGAGGGACCAGATGCGGTTCCGTCTGCTTCTGTCGCCAACGGAGCGAACACCGGGGCACGGGACCGCGACGACGACCAAGGTGAGTGGACGAGGTGAGAGACCGAGAGAGCGACGAGGTGAGGCCGTGAGAGACTGA 1593 0.5141 GFRTSKPPQNHKPNDKPCATSSTTIMARIARSSAPRLLYTFFSSSVPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERVLRVLDGAILVLCSVGGVQSQSITGVQPLLDGVLNYLPCPIEVSSYALDQTKNEEKVELTGSLDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIINVNTGKKIKVPHLVRMHSDEMEVRYIEPLRAGSPTKFEFENLLVGQAIPSGFIPAIEKGFKEAANSGALIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYTASRPFILEPVMLVELKVPTEFQGAVAGDINKWGEADGEGEANGKARSKKTTTKTSPPGPVASITGDEERREGRDRDQVQDRDREKQEDDHHHYPRDQMRFRLLLSPTERTPGHGTATTTKVSGRGERPRERRGEAVRD 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00013 530 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 26 208 IPR045044 -
Aip02g00013 530 SMART EFG_IV_2 284 395 IPR005517 GO:0005525
Aip02g00013 530 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 95 208 IPR000795 GO:0003924|GO:0005525
Aip02g00013 530 Gene3D - 303 420 IPR014721 -
Aip02g00013 530 TIGRFAM small_GTP: small GTP-binding protein domain 97 202 IPR005225 GO:0005525
Aip02g00013 530 PRINTS GTP-binding elongation factor signature 168 178 IPR000795 GO:0003924|GO:0005525
Aip02g00013 530 PRINTS GTP-binding elongation factor signature 148 156 IPR000795 GO:0003924|GO:0005525
Aip02g00013 530 PRINTS GTP-binding elongation factor signature 184 195 IPR000795 GO:0003924|GO:0005525
Aip02g00013 530 PRINTS GTP-binding elongation factor signature 99 112 IPR000795 GO:0003924|GO:0005525
Aip02g00013 530 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 307 423 IPR045044 -
Aip02g00013 530 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 208 305 IPR045044 -
Aip02g00013 530 Pfam Elongation factor Tu GTP binding domain 96 209 IPR000795 GO:0003924|GO:0005525
Aip02g00013 530 MobiDBLite consensus disorder prediction 515 530 - -
Aip02g00013 530 Gene3D - 84 208 IPR027417 -
Aip02g00013 530 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 307 423 - -
Aip02g00013 530 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 26 208 - -
Aip02g00013 530 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 208 305 - -
Aip02g00013 530 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 141 156 IPR031157 -
Aip02g00013 530 SUPERFAMILY Ribosomal protein S5 domain 2-like 308 396 IPR020568 -
Aip02g00013 530 Pfam Elongation factor G, domain IV 309 394 IPR005517 GO:0005525
Aip02g00013 530 MobiDBLite consensus disorder prediction 425 439 - -
Aip02g00013 530 MobiDBLite consensus disorder prediction 1 21 - -
Aip02g00013 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 208 IPR027417 -
Aip02g00013 530 MobiDBLite consensus disorder prediction 456 490 - -
Aip02g00013 530 MobiDBLite consensus disorder prediction 423 530 - -
Aip02g00013 530 SUPERFAMILY Translation proteins 208 305 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00013 Aip-Chr2 266563 277279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00013 96 206 Eukaryotic Initiation Factors Gene Family AT3G22980 38.053 1.76e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00013 K02355 - gmx:100796646 293.893