Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00001 ATGGCACGGATAGCCAGGTCCTCTGCGCCGCGCCTGCTCTACACCTTCTTCTCCTCTTCCGTGCCCCCGGCATCCCCATCGCCGTCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGTGCATTCCACCTGCGGCACTTCTCGTCGGGTAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAACATCGGGATCTCTGCTCACATCGACTCCGGCAAGACAACTTTGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGCAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGAGGGAGAAAGGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGACTAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTTGAGATGGCTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAATCCATGGAAAGTTTTAAATCAGGCACGATCTAAACTTCGGCATCATAGTGCTGCAATGCAAGTTCCGATAGGCTTGGAGGATGATTTTGAGGGACTTGTTGATCTTGTGCAGTAA 651 0.5376 MARIARSSAPRLLYTFFSSSVPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKTNIIDTPGHVDFTIEVEMALRVLDGAILVLCSVGGVQNPWKVLNQARSKLRHHSAAMQVPIGLEDDFEGLVDLVQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00001 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 215 IPR027417 -
Aip02g00001 216 Pfam Elongation factor Tu GTP binding domain 71 181 IPR000795 GO:0003924|GO:0005525
Aip02g00001 216 Gene3D - 179 216 IPR027417 -
Aip02g00001 216 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 179 216 IPR045044 -
Aip02g00001 216 TIGRFAM small_GTP: small GTP-binding protein domain 72 177 IPR005225 GO:0005525
Aip02g00001 216 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 116 131 IPR031157 -
Aip02g00001 216 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Aip02g00001 216 PRINTS GTP-binding elongation factor signature 123 131 IPR000795 GO:0003924|GO:0005525
Aip02g00001 216 PRINTS GTP-binding elongation factor signature 159 170 IPR000795 GO:0003924|GO:0005525
Aip02g00001 216 PRINTS GTP-binding elongation factor signature 143 153 IPR000795 GO:0003924|GO:0005525
Aip02g00001 216 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 216 IPR000795 GO:0003924|GO:0005525
Aip02g00001 216 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 178 - -
Aip02g00001 216 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 179 216 - -
Aip02g00001 216 Gene3D - 59 178 IPR027417 -
Aip02g00001 216 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 178 IPR045044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00001 Aip-Chr2 81575 83579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00001 71 187 Eukaryotic Initiation Factors Gene Family AT3G22980 38.983 9.26e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00001 K02355 - gmx:100796646 338.961