Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03412 ATGGCATCTTCCAAGCATAGAAACGCATGCTCCTTCACCACCATCCTCCTTATCTGTTTGAACTTGTCACTGTTTGTAATCTCCGCAGCCTCTTTTGCTCCCACAATCCTCCTCAAGATGCCCCCAACCTCCTTCGGCATGGCGTTCTTCATGGTCTCCGGCATCTCAATTCTCTCATCCCTTGTGGGGTTCTACTCCCAGCTCACATACTTATGCTTCCTCACCCACATTTCCCTTGTATTAGCCTCATTGGTAGGTCAAATTCTCACCATATTAGCCTTGTTTACAAGAGAGAAAGCAAGCCTGTCTCTGCTTAAGTCGCCTCGAGACCCGAAAGAAGCTAAGTTCTTGGTGAGGATGGAATGCGGGGCTTTGATGGCAATGTGCATGTTGCAGGTGGTTGTGTTGGTCCTGAGTTGTGCAGTGCATAGTTGTTGGGTCAAAGACTATGAGGAGCTGGAAGCAGAGAAGGAAGCCATGGCTAGGAAGAGAAGCAGAAAGATGGCAAAAGTGCAAGAGGAATCCATGGCTAATGGAACCAAAATTGCACAGTGCAAAACCAAGGAGTTGGATGAGAACATGAAAAGCAAAAATGAGCAGGCTATGGATTCCAATTTTTCTCCAACGATGAGCAACAAGAAGAAGAAGGAACTTTCGGTTCAGCTTCCGAGTTCAGCGCCGCCAATCCCAAAGTTCGAAACTTCGAGGTTCTGTGATCTTCACTTTGACCGATTACAGCCATCGGATCAAGAATTGGATCAGCATAGTAGGTTCGAATTTGGCCAATTCGTTGCACGACAAGCCCTCCTTGATGAAGAGTATTGGACAGCAGCATGGCTGAGGGCAGAAAGTCATTGGGAGAATCGACCATATGAACGATATACTGATCATTATAAAAGGAAATTTGCAGATCAGGAATTTCATGCAATAAAACGGCGGTGTAGGGTGCAAATTGTGCCAAATGGGGAGAGTTGCACTTGCATTATCACGGTGAGGAAAGAGCAAAAGAATGTAAAACGCTCAATAATTAAAAGTGTTGTTGGGACCCTTGATTTGAATATCCGGTACATGCTGCAAGGAGAGACTTTTCCTGGGGAACGAGCGAAGGCTCCTCCATTCTGCGGCATCAACAAAACACCATCAAGCAGATATGGCTACATTTCAAACTTGTGTGTTGCCAAATCAGCACGACGCCAGGGGATTGCAAGCAACATGCTCCATTTTGCTGTTGAATCTGCAAAATCCATAGCAGGTGTAGCACGTATATTTGCACATGTGGATAGAAATAATGGAGCTGCACAATCATTGTACAAGAACATGGGCTTTGAGATCGTTGAAATGGCAAACGCACTGTTGTTAGATGAGCAAACATACTTGCTCCGTTTACAGACGTAA 1395 0.4545 MASSKHRNACSFTTILLICLNLSLFVISAASFAPTILLKMPPTSFGMAFFMVSGISILSSLVGFYSQLTYLCFLTHISLVLASLVGQILTILALFTREKASLSLLKSPRDPKEAKFLVRMECGALMAMCMLQVVVLVLSCAVHSCWVKDYEELEAEKEAMARKRSRKMAKVQEESMANGTKIAQCKTKELDENMKSKNEQAMDSNFSPTMSNKKKKELSVQLPSSAPPIPKFETSRFCDLHFDRLQPSDQELDQHSRFEFGQFVARQALLDEEYWTAAWLRAESHWENRPYERYTDHYKRKFADQEFHAIKRRCRVQIVPNGESCTCIITVRKEQKNVKRSIIKSVVGTLDLNIRYMLQGETFPGERAKAPPFCGINKTPSSRYGYISNLCVAKSARRQGIASNMLHFAVESAKSIAGVARIFAHVDRNNGAAQSLYKNMGFEIVEMANALLLDEQTYLLRLQT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03412 464 Coils Coil 150 170 - -
Aip01g03412 464 CDD NAT_SF 373 425 - -
Aip01g03412 464 Gene3D - 267 464 - -
Aip01g03412 464 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 373 464 IPR000182 GO:0016407
Aip01g03412 464 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 160 464 - -
Aip01g03412 464 Pfam Acetyltransferase (GNAT) family 320 442 IPR000182 GO:0016407
Aip01g03412 464 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 288 446 IPR016181 -
Aip01g03412 464 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 160 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03412 Aip-Chr1 137071142 137075597 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aip01g03412 Acetyltransf_1 3e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03412 - - adu:107457848 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03412 01 137071142 137075597 Aip01g03412 01 137071142 137075597 ECH