Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03387 ATGGTTTGGTTTCAATGCGAGGACTGCGGCGACAACCTCAAGAAGCCCAAGTTGGCTGGTCACTTCCGAAGCTGCTCCGCTTACAGGTTATCATGCATTGACTGTGGTGAAACTTTTGGCCAAGACACCGTTCAGAACCACACTCAGTGTATGACCGAAGCGGAAAAGTATGGTCCAAAGGGGCAAGTCAAGAATGGTGCACCTGCAAAGCCTAACAAGGATGGCAACAAGCAAAAGCCTGATGTTGATATCAATGTCGGTTTGTCCGAACGCCCTCCATGGTTTTGTAGTCTTTGCAATACACAAGCTACCAGCAAGCAAACACTTCTTCTCCATGCCGATGGGAAGAAACATCGGGCAAAAGCCCGAGCATACCATGCTTCTAAGCAACCACCGCCCCAGACAGACAAATCTGCACCTGATGCTAAGATTGTGTCGGAGGCTGCTCCTAATGAGGCTACAGACGGCAAAAATGCAGAGCAGCCAAAATTAGAAGAGTCTTCTAAACAAGATAATTTGAAATCAGGGGACAAAATTTCTTCAGCAAAAAAGAGGAAACTTGAAGCGTCGGAGGGTGATCTTATTAAAAAATGCAGGAATGACATTTCTGTTGACACTGGAAATGGAGAAGTTATTCAGGGTGAAGAAGCAGAAGGGAAAGTAGAATCTGCTGTCAAAAATAAAATTAAGTGGAAGAAGTTTATCAAATCAGCTCTGAAATCTGTATGTTCTTTTAACGTTGAAATGACATACTTTCTTGTTTTGTGCTTCATTTACCTGTCTTATACTGATCCTATTTGTATATTTTGGGCATGA 816 0.4326 MVWFQCEDCGDNLKKPKLAGHFRSCSAYRLSCIDCGETFGQDTVQNHTQCMTEAEKYGPKGQVKNGAPAKPNKDGNKQKPDVDINVGLSERPPWFCSLCNTQATSKQTLLLHADGKKHRAKARAYHASKQPPPQTDKSAPDAKIVSEAAPNEATDGKNAEQPKLEESSKQDNLKSGDKISSAKKRKLEASEGDLIKKCRNDISVDTGNGEVIQGEEAEGKVESAVKNKIKWKKFIKSALKSVCSFNVEMTYFLVLCFIYLSYTDPICIFWA 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03387 271 MobiDBLite consensus disorder prediction 158 185 - -
Aip01g03387 271 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 241 IPR039999 GO:0003677
Aip01g03387 271 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Aip01g03387 271 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Aip01g03387 271 Gene3D Classic Zinc Finger 88 130 - -
Aip01g03387 271 SUPERFAMILY beta-beta-alpha zinc fingers 83 127 IPR036236 -
Aip01g03387 271 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Aip01g03387 271 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Aip01g03387 271 MobiDBLite consensus disorder prediction 58 86 - -
Aip01g03387 271 Pfam Zinc-finger of C2H2 type 94 118 - -
Aip01g03387 271 Gene3D - 1 50 - -
Aip01g03387 271 SMART ZnF_U1_5 91 125 IPR003604 GO:0003676|GO:0008270
Aip01g03387 271 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Aip01g03387 271 MobiDBLite consensus disorder prediction 114 185 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03387 73 222 C2H2 Transcription Factor Family AT2G19380 41.447 2.22e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03387 K15263 - gmx:100790703 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03387 01 136896692 136899514 Aip01g03387 01 136896692 136899514 ECH