Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03381 ATGGAGGAAATATCTTCTAGTGTTGCAGTGCCATTTACAATTGGGAACTTGATTCAGAAGGAGTCAGCAGTGGCAACCCACGTGGAGATAACTGGTATAAAGCTTATGGCAAATACTGCTGCAGCTTTAATATTAAATCCTTCAGTGGAAGGTTGCCAACCATATTCTGTTGGAAGTGATAATCATTCTGATGTAAGTCTCAAACATCAAATTACGGTATCTGCAGAGATGAAGGAGAATGAAGTTGGAGCTGCCGTTGTCTCAGAAATGGTTATTGAATGTGACAGTAATTGGGTCTTGAGAGAAAGCCATAACCCACCAAGGAAGGAAGATGAATTCATGCTGGCTGTGGATTTTCGTTGTCTACATAGTTCAAGCTCCAATGACAAACGCAGCCCCTCTGGGGAGGAAGCTGCATCCTTGAAGGCCATTTATTCTGAGATAGATTCGCCAGTTATCATCGGGGTTGATGATAAAATCTATGCTGAGTATGGATTAAACAAGACACATCCAGCACTGCAGCCAGAGGAGAACACAGTTTCTGTTGCAATGGATCTTGAGAGTGAGGATCCAAGGGGATTGGATGGGTCTGATCCAAAGTTTTGTGCTGCACCTCTTGATCAGGCTAACAGAACAAGCAACCCGAATGCTTCGGAAGTGAGTAGTCGTGTTCTCTGTGGTTTTTCATCAATCTGTGGAAAAAGACCAGAGATGGAAGATGCTATAGCTGTTAAGCCTAAACTTCTTCAAGTTCCTTCAAAGATGCTAACAGATAGCCATGTGAACGATAACACAATATGCTCATTAGCCCACTTTTTCGGTGTCTATGATGGACATGGAGGCTTTCAGGTTGCCAATTACTGCCGGGAACGCCTGCATTCAGCTTTGATTGAGGAGATAGAAGCTGCACAATCAAGTTTGGCAGAAACAGAACTGGGAGATTCTTTACAGGACTATTGGAAGAAAGCATTTGTAAGTTGTTTTCAGAAAGTTGATGATGAAGTTGGAGGAATTCGAGCTGGTAATGGCGGAAATAACATTGGTGGACTAGAGTCTACGATTGAACCAATTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATATTGAATCAATCACACATAATAGTCGCAAATTGTGGGGATTCAAGAGCCGTCTTGTATCGCGGAAAAGAAGCCATTCCATTGTCTGCTGACCACAAACCAAACAGGGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATACATTGGCAAGGGTACCGAGTTCTTGGCGTTTTGGCAATGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGTATTATTCCAGAACCGGAAGTGAAGTTTGTGCAACGGGAGAAACATGACGAGTGCCTTATTCTAGCTAGTGATGGTTTATGGGATGTGGTGACAAATGAAGAAGCCTGTGAAGTTGCACGGAAGAGGATCCTTCTTTGGCACAAGAAGTATGGCGAGAATGCGTCAATGACCGAACAAGTTGAAGAAGGAGTTGACCCTGCAGCTCACTCTGCTGCAGAGTATCTCTCTAGACTTGCCCTCCAAAGGGGAAGCAAAGATAACATCTCTGTAATTGTGATAGACTTGAAGGCTCAAAGAAAAATTAAGAGAAAAGCATAA 1653 0.438 MEEISSSVAVPFTIGNLIQKESAVATHVEITGIKLMANTAAALILNPSVEGCQPYSVGSDNHSDVSLKHQITVSAEMKENEVGAAVVSEMVIECDSNWVLRESHNPPRKEDEFMLAVDFRCLHSSSSNDKRSPSGEEAASLKAIYSEIDSPVIIGVDDKIYAEYGLNKTHPALQPEENTVSVAMDLESEDPRGLDGSDPKFCAAPLDQANRTSNPNASEVSSRVLCGFSSICGKRPEMEDAIAVKPKLLQVPSKMLTDSHVNDNTICSLAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAAQSSLAETELGDSLQDYWKKAFVSCFQKVDDEVGGIRAGNGGNNIGGLESTIEPIAPETAGSTAVVAILNQSHIIVANCGDSRAVLYRGKEAIPLSADHKPNREDEWARIEAAGGRVIHWQGYRVLGVLAMSRSIGDRYLKPCIIPEPEVKFVQREKHDECLILASDGLWDVVTNEEACEVARKRILLWHKKYGENASMTEQVEEGVDPAAHSAAEYLSRLALQRGSKDNISVIVIDLKAQRKIKRKA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03381 550 ProSitePatterns PPM-type phosphatase domain signature. 272 280 IPR000222 GO:0043169
Aip01g03381 550 Gene3D - 215 550 IPR036457 -
Aip01g03381 550 PANTHER ALPHABET, ISOFORM E-RELATED 119 549 - -
Aip01g03381 550 SMART PP2C_4 215 538 IPR001932 -
Aip01g03381 550 Pfam Protein phosphatase 2C 237 533 IPR001932 -
Aip01g03381 550 ProSiteProfiles PPM-type phosphatase domain profile. 225 540 IPR001932 -
Aip01g03381 550 CDD PP2Cc 226 540 IPR001932 -
Aip01g03381 550 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 119 549 - -
Aip01g03381 550 SUPERFAMILY PP2C-like 219 541 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03381 Aip-Chr1 136866211 136869547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03381 210 549 PP2C-type Phosphatase Gene Family AT4G26080 60.174 9.87e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03381 K14497 - gmx:100802159 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03381 01 136866211 136869547 Aip01g03381 01 136866211 136869547 ECH
Aip01g03381 01 136866211 136869547 Aip03g02559 03 45132994 45135097 PCT