Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03371 ATGGGATTATCACTTTCATTACTCCAATCGGCTTGGGAAGAAGTTGTTACATACTCTTCACTCATTGATGTACCTTTCAACATCACTTTTGCTTCCAAAGATGGAGCTTTGATTCTGAGAGCATCATCAAGCTTCAACAAAAGAGAAGCTGATGATTCTGATTCTAATAATGTCACACGTTCAAGGCGTTTGAGGGAACACAGACCCCAGAATGTGGTTCTTGAAAGAAGCTACTCCTTTGTTCAACATAAGGAGGAGAAAATGGATCATGATTCTTCTTCTTCCATTGTTAAGAGAGAAGTTCCTCTGCTTTCTCTGCCTCAGGAAGTGGTTTTCTCTTCACCTAGGCCAGTGAGTGAACTTGATGCTGCTGCAACAAAACTCCAAAAAGTGTATAAGAGTTACCGCACTAGAAGAAACCTTGCAGATTGTGCAGTTGTTGTTGAGGAGCTATGGTGGAAGGCTTTGGATTTTGCTGCTCTCAAGAGAAGTTCAGTTTCCTTTTTTGATGTGGAGAAGCCGGAAACCGCTGTGTCAAGGTGGGCAAGGGCTAGAACAAGAGCTGCTAAGGTTGGAAAAGGTTTATCCAAGGATGAAAAGGCACAAAAATTAGCACTTCAACATTGGCTTGAAGCTATTGACCCTCGTCATCGCTATGGACATAATCTACACATATACTATGATATTTGGTTTGAAAGCCAGAGCACTCAGCCATTTTTCTACTGGTTGGATATTGGAGATGGCAAGGAAATAAATCTTGAGAAATGTCCAAGGACCACTCTGCAACGCCAGTGCATCAAGTATCTTGGACCTAATGAAAGGGAAGAATATGAAGTGATTGTTGAGAATGGGAAGCTTGTGTACAAACAAGATGGGAGAGTTGTGGATACTGATGAAAAGTCAAAATGGATATTTGTTTTGAGCACCACAAGGTCTTTGTATGTTGGAAGAAAACAAAAGGGTACCTTTCAGCACTCAAGCTTTCTTTCTGGTGGTGCCACCACAGCAGCTGGCAGATTAGTTGCTCGTCGCGGTGTCCTTGAGGCAATTTGGCCTTATAGTGGTCACTACCACCCTACTGAAGAGAACTTCAAAGAGTTCATAAGCTTTCTTGAAGACAACAATGTAGACCTATCCAATGTGAAGAGATGTGCAATAGATGATGATACTCCATCACTGATTGGGACTAATTCATTCACTAACCAATCACAATCAGTACCTGCTACAACTGCAATTAATAATGAGAATGAGAGCAACATTGTACCAACCAATAAGGAGGGTGGCCAAATATTAAACCTCTCAAAGAGGTTGTCTTGCAAGTGGTCAACTGGGGCTGGGCCTCGTATTGGGTGTGTGCGTGACTACCCTGGACACCTTCAATCAAGAGCGTTGGAGCATGTCCATTTGTCTCCAAGGCCCACTTCTTCACGCGTTACTAACTATGGCCCAATTCCATCACCTAGGCCCAGCCCAAAAGTTAGAATGTCCCCTAGGCTTGCATATATGGGATTACCAAGCCCAAGAAACCCAATCCCAGCTGCAAGTACTAATATTCAGACTAACGAAGAAGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTTTACGAATCCAAATTATACAGAATTCTACAAGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGGGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTCAACTTTTGTAGTAGAAAGCTGTCACTAAAGACTGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTCGAGTTCATCCATTCTAAATCATTTCTACATCGGGATATTAAACCGGATAATTTTCTGATGGGCCTAGGAAGGCGTGCGAATCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAGCAAAGTCGCAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGAAGTCTTCCTTGGCAGGGACTTAAAGCTGGAACAAAGAAACAAAAGTACGAGAAAATCAGTGAAAAAAAAGTTTCTACCTCAATTGAAGCACTATGTCGTGGCTATCCAACTGAATTTGCATCATACTTCCACTACTGCCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGGATATTTCGCGACCTCTTTATTCGTGAAGGTTTCCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAACTAGCCACTCCTCCGGCACGGGGCATTGTGAGCATTCCCTTAACACATCTCTCCAACCTACTTCCAAAGAAGAAAAATCCTTGCTCTTTTGGGAATCTTGTTATCTGA 2472 0.4171 MGLSLSLLQSAWEEVVTYSSLIDVPFNITFASKDGALILRASSSFNKREADDSDSNNVTRSRRLREHRPQNVVLERSYSFVQHKEEKMDHDSSSSIVKREVPLLSLPQEVVFSSPRPVSELDAAATKLQKVYKSYRTRRNLADCAVVVEELWWKALDFAALKRSSVSFFDVEKPETAVSRWARARTRAAKVGKGLSKDEKAQKLALQHWLEAIDPRHRYGHNLHIYYDIWFESQSTQPFFYWLDIGDGKEINLEKCPRTTLQRQCIKYLGPNEREEYEVIVENGKLVYKQDGRVVDTDEKSKWIFVLSTTRSLYVGRKQKGTFQHSSFLSGGATTAAGRLVARRGVLEAIWPYSGHYHPTEENFKEFISFLEDNNVDLSNVKRCAIDDDTPSLIGTNSFTNQSQSVPATTAINNENESNIVPTNKEGGQILNLSKRLSCKWSTGAGPRIGCVRDYPGHLQSRALEHVHLSPRPTSSRVTNYGPIPSPRPSPKVRMSPRLAYMGLPSPRNPIPAASTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARGIVSIPLTHLSNLLPKKKNPCSFGNLVI 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03371 823 MobiDBLite consensus disorder prediction 472 494 - -
Aip01g03371 823 SMART serkin_6 516 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03371 823 CDD STKc_CK1_delta_epsilon 516 771 - -
Aip01g03371 823 Gene3D Transferase(Phosphotransferase) domain 1 511 795 - -
Aip01g03371 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Aip01g03371 823 MobiDBLite consensus disorder prediction 47 66 - -
Aip01g03371 823 ProSiteProfiles Protein kinase domain profile. 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03371 823 SUPERFAMILY Protein kinase-like (PK-like) 516 779 IPR011009 -
Aip01g03371 823 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 1 514 IPR044159 -
Aip01g03371 823 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM5 1 514 - -
Aip01g03371 823 Pfam Protein kinase domain 517 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03371 Aip-Chr1 136791857 136799983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03371 589 771 MAP Kinase Kinase Kinase AT1G62400 27.568 6.07e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aip01g03371 Pkinase 6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03371 - - gmx:100776993 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03371 01 136791857 136799983 Aip01g03371 01 136791857 136799983 ECH