Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03354 ATGAGGGTGGTATTGGCAATGATGCTGCAACTTCTTAAGCTCTGCATCATTTTTCTTTCTGTTGCTGTCCCACGATCCAAAGGGTCCACTGTATCTCCATCTCCAGCATTCCTTCCTGTGATTCCTTCACTTGGAAGCAATGCACCAAGTTTACCATTACTTCCACATGGCCTTGTTGTACCTCCATCTCCAGCAAGAGGTTCATGGACTAACATTGCCCCAAGCTCTCCAGAAGTAGCAAATGGGTCATTCTTGCTTCCTCCGGATGCTTTACCACTTCCTGCATCAGCTCCAACTCCTCAGAAGCATGATAAGGACATAGAACCATCCACAACTCCAAGTCCAACTACTATAGCATTGTCACCACCACCACATGAGGTTGTTCCTTTGCCATCAACGCCACAAGGAAATGCGCCGCTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCACCTAACATTGGTAATGGGAATGCAAATCTGAGTCACAAAGAAGAGCCGGTTTCACCATCACCAGCTGCAACACATTCTATCAATTTGCCGAAAATTTCACCAAGCATCCAACCAACCGATAATGGAAGTTTTCCTCCTCAAGAGGGCACAAAGAAAGGTCACAATTCAGAACCAGTTACACCAGAATCTGCTGCATCACCACCATGGAAAGCGGAGCATAATCCTTCTCCTCCACCACCAGAAGCACACCCTATTAGTCCATCCATATTGCCTGCACCTGTTGCATCACCAGCAAGTTCATTTCCAGCGAATCCGCCACTGGTCCATCCAATTATTCCATCAACATTACCAGCACCTGTTGCCTCTCCCAAGTCATCTTCTTCTGGAAGCTTCAATTGGAAAAATGGTGATGCACCACCAATTGCTGTACCTTTGTACAAATCACCAAAACCACTTCCAGCTGTAGTACATTCCCCTGCTCAAGCTCCTGCTGCACATAATTCAAGGCAAATTGATCATGATCCTGAGCCATTGACTAAAACTCCTAATAAAGAAAAGCATACGCCTGCATTGTCACCTTCTGCCTCATCACATCAGCATCATCATACAAGGAACACAACTGCCAGTTCTGCTCCTCCACCACCATCACCATACATGGTTTCTTCTTCCCCTTCAAATCATCAAGGTAAAGCAATTCCTCCTTCATTACAACCAAAAAGTGGGCAAAGGCATCATGTTTCACCTCCAATGAACCAAAGTTCTTCAATTCCTTCATTCTCTTCTCCTACTCATTCACCCATGACCCAAGTTTCGCCGGCTCCTTCATCATCAATCGAACTTGCTCCTCACCCAACTGAAATGCAAGCTCCATTTCTTCCCCCTAAAGTATCTCCTTCTCCCTCAAAGACACCATCCCCGCCTCAAGTTCGAGCATTGCCACCCCCACCTCCAAATGAAGAGTGTTCATCAACCGTCTGCTTAGAACCTTATACAAACTCTCCACCCGGAGCACCTTGCAGATGTGTTTGGCCCATGCGAGTCGGTCTCCGTGTCAGTGTCTCTCTTTATACCTTCTTCCCTTTGGTTTCAGAGCTGGCTTCTGAAATTGCTACCGGAGTTTTCATGAGGCAAAGTCAAGTTCGGATTATGGGAGCAAATGCAGCAACCGAGCAACCTGAGAAAACGGTTGTCTTAATTGATTTGGTACCACTTGGTGAAAACTTTGACAGTACTACAGCACTTTTCACTTCCAACAGATTCTGGCATAAACAGGTTGCTATAAAAGCTTCCTACTTTGGAGACTATGATGTTTTATATGTGAGCTATCCAGGTTTGGCTCCTTCTCCTCCTTTACCACCTTCAACCATTTCCATCATTGATGGTGGTCCATATTCCATTGATGGCAATAATGGAGGGACAATAAAGCCCCTTGGAGTGGACATACAGAAGAGGCAGCATAAAAGTGGACTTAGCAGAGGCATAGTTGCCATTATAACTGTTTCAGTTTTTCTAGCAGTTGTGTTATGTGCTGCCGCAGCAGCAGCCTGGGTTATGCTCAAGTATGGAGATCATGTTACTCAACCGGCATCAACGCCACGGCTTTCACAACCTTCTCTTACCAAACCACCAGTGAATTTCACAGGTAATGCTGCATCATTAGTGGGAGGTGGGGTTGGTTCTGCTTCGACATCATTTCGATCTAGCATTGCTGCTTATACAGGGTCTGCTAAGACTTTCAGTGCGAATGATATTATAAAAGCTACTGATAATTTTCATGGTTCAAGAATACTTGGAGAAGGTGGTTTTGGGCTGGTTTATGGTGGCATCCTTGAAGATGGAACAAAAGTGGCAGTCAAGGTTATAAAGAGGGAGGATCATCACGGGGATCGCGAGTTCTTAGCTGAAGTTGAGATGCTTAGCCGTCTTCATCATAGAAATCTGGTCAAGTTGATTGGGATATGTACCGAGGAAAGTGTCCGCTGCTTGATTTATGAACTTGTTCCAAATGGCAGCGTGGAATCCCACTTACATGGAGTTGACAGGGAAAGTAGTCCACTTGGTTGGAGTGCTAGGATGAAGATAGCTCTTGGCGCGGCTCGCGGTCTAGCCTATCTGCACGAAGATTCGAGTCCCCGTGTTATACACCGGGACTTCAAATCAAGCAACATATTGTTGGAAGATGATTTCACACCAAAAGTATCCGATTTTGGATTGGCTCGAACAGCAACAGATGAGAATAATAATAGACACATATCAACACGCGTCATGGGAACTTTCGGTTATGTGGCTCCGGAGTATGCAATGACAGGACACCTTCTTGTTAAGAGTGATGTTTACAGCTACGGCGTTGTTCTTCTTGAGCTTTTAACAGGAAGAAAGCCTGTGGACATGTCACAACCTCCCGGTCAAGAAAACCTTGTTGCTTGGGCTCGTCCGCTTCTGGCGAGTCGAGAAGGATTGGAGGCAATAGTAGATCCAGATCTAGGAGGAGATGTGAGTTTTGAGAGTGTGGCCAAAGTTGCAGCAATTGCTTCAATGTGTGTGCAGCCAGAGGTATCGAACCGGCCTTTCATGGGGGAGGTTGTGCAGGCCTTAAAACTCGTGTGCAATGAATGCGAGGAAGCGAAAGAAGCAGGTGGTTCAAGAAGATCATCCACTCAGGATATGGATTTGGATGTGAGAGTGAGCAATGTGGATGTTGAGAGAGGATTGGTTGCATCAGAACTATTCAGTTGTTCGGTAAGATTGGGAAGGCAGGAAGAGGAATCTGGATCGTTTAGAAGACACTCGTATTCGGGTCCTCTGATGACCGGAAGAAGCAGGCAGTTATGGCAGATTATGAGACGGCTTTCTGGTGGCACTGTCAGTGAACATGCAAGTATCTTCAACTTATAG 3594 0.4246 MRVVLAMMLQLLKLCIIFLSVAVPRSKGSTVSPSPAFLPVIPSLGSNAPSLPLLPHGLVVPPSPARGSWTNIAPSSPEVANGSFLLPPDALPLPASAPTPQKHDKDIEPSTTPSPTTIALSPPPHEVVPLPSTPQGNAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPNIGNGNANLSHKEEPVSPSPAATHSINLPKISPSIQPTDNGSFPPQEGTKKGHNSEPVTPESAASPPWKAEHNPSPPPPEAHPISPSILPAPVASPASSFPANPPLVHPIIPSTLPAPVASPKSSSSGSFNWKNGDAPPIAVPLYKSPKPLPAVVHSPAQAPAAHNSRQIDHDPEPLTKTPNKEKHTPALSPSASSHQHHHTRNTTASSAPPPPSPYMVSSSPSNHQGKAIPPSLQPKSGQRHHVSPPMNQSSSIPSFSSPTHSPMTQVSPAPSSSIELAPHPTEMQAPFLPPKVSPSPSKTPSPPQVRALPPPPPNEECSSTVCLEPYTNSPPGAPCRCVWPMRVGLRVSVSLYTFFPLVSELASEIATGVFMRQSQVRIMGANAATEQPEKTVVLIDLVPLGENFDSTTALFTSNRFWHKQVAIKASYFGDYDVLYVSYPGLAPSPPLPPSTISIIDGGPYSIDGNNGGTIKPLGVDIQKRQHKSGLSRGIVAIITVSVFLAVVLCAAAAAAWVMLKYGDHVTQPASTPRLSQPSLTKPPVNFTGNAASLVGGGVGSASTSFRSSIAAYTGSAKTFSANDIIKATDNFHGSRILGEGGFGLVYGGILEDGTKVAVKVIKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEESVRCLIYELVPNGSVESHLHGVDRESSPLGWSARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDENNNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLASREGLEAIVDPDLGGDVSFESVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECEEAKEAGGSRRSSTQDMDLDVRVSNVDVERGLVASELFSCSVRLGRQEEESGSFRRHSYSGPLMTGRSRQLWQIMRRLSGGTVSEHASIFNL 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03354 1197 MobiDBLite consensus disorder prediction 217 558 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 254 295 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 520 553 - -
Aip01g03354 1197 Coils Coil 140 140 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 80 142 - -
Aip01g03354 1197 ProSitePatterns Protein kinases ATP-binding region signature. 830 852 IPR017441 GO:0005524
Aip01g03354 1197 MobiDBLite consensus disorder prediction 304 324 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 116 130 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 331 350 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 352 367 - -
Aip01g03354 1197 PANTHER OS01G0750732 PROTEIN 371 1196 - -
Aip01g03354 1197 SUPERFAMILY Protein kinase-like (PK-like) 804 1098 IPR011009 -
Aip01g03354 1197 Gene3D Phosphorylase Kinase; domain 1 796 899 - -
Aip01g03354 1197 Gene3D Transferase(Phosphotransferase) domain 1 900 1124 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 454 515 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 418 442 - -
Aip01g03354 1197 MobiDBLite consensus disorder prediction 402 416 - -
Aip01g03354 1197 ProSiteProfiles Protein kinase domain profile. 824 1101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03354 1197 CDD STKc_IRAK 830 1099 - -
Aip01g03354 1197 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 371 1196 - -
Aip01g03354 1197 ProSitePatterns Serine/Threonine protein kinases active-site signature. 946 958 IPR008271 GO:0004672|GO:0006468
Aip01g03354 1197 Pfam Protein tyrosine and serine/threonine kinase 827 1096 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03354 Aip-Chr1 136611334 136617329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03354 313 1193 Receptor kinase-like Gene Family AT5G56890 54.497 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aip01g03354 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03354 - - gmx:100816296 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03354 01 136611334 136617329 Aip01g03354 01 136611334 136617329 ECH