Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03337 ATGGAGTCACAGATTGCCATACAAGAAGCTGCTTCCGCTGGTTTGAAGAGCATGGAGCATCTCATCCGACTTCTCTCTTCACAATCCCCTTCTTCTTCTTCTTCTTCTTCTCACGATAATCACTACCGCATCGATCTCAATAACCGTGACTGCACAGAAATCACCGACTTCACAGTTTCAAAGTTCAAACAGGTTATTAACTTGTTGAATCGCACCGGTCATGCTCGCTTCCGTCGCGCACCTTCTCAATCTCAACCTCAGCTTGACCAATCAAAAGTCGTAGTGCCACCTCCTCCTCCTCAGGGTTTGACTCTAGATTTTGCTAAGCCCGTTCAGGTCAACCAGCCATCAATTAATAATCCAAATAACCACTCAAAGTCTAAGAATAATAATAATAATCCAAATACATCATGTAGCACATCGCTTTCTCCTCCCATGTCCACCACCACCTCCTCCTTCATGTCCACCATCACCGGAGATGGCAGCGTCTCCGACGGTAAGATAGGTCCTTTCATCATCGCCGCTGGGAAGCCTCCTCTCTCCTCATCTCACCGTAAAAGGTGTCACGACGCCACCCTTTCCTCGGGAAAAGCCACATCCTCCTCCTCCCAGTGTCATTGCTCCAAGAGAAGGAAAACCCGTGTGAAACGAGTGGTTCGAATGGCGGCAATAAGCTCAAGGATTGCAGATATCCCAACCGACGAATACTCGTGGAGGAAATACGGTCAAAAACCTATCAAGGGATCACCCTACCCTCGTTACTACAGGTGCAGTAGCGTGAGAGGGTGTCCAGCCAGGAAGCACGTGGAGAGAGCACAAGACGACCCCAACACGCTCATCGTTACTTACGAGGGTGACCACCGCCACACCCAAACACAACCACAACCCGTTGGATTTTCCCCTCAGCATCTTTCATCAACGGCACTCACGCCTGCCACCTGA 942 0.4968 MESQIAIQEAASAGLKSMEHLIRLLSSQSPSSSSSSSHDNHYRIDLNNRDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSQSQPQLDQSKVVVPPPPPQGLTLDFAKPVQVNQPSINNPNNHSKSKNNNNNPNTSCSTSLSPPMSTTTSSFMSTITGDGSVSDGKIGPFIIAAGKPPLSSSHRKRCHDATLSSGKATSSSSQCHCSKRRKTRVKRVVRMAAISSRIADIPTDEYSWRKYGQKPIKGSPYPRYYRCSSVRGCPARKHVERAQDDPNTLIVTYEGDHRHTQTQPQPVGFSPQHLSSTALTPAT 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03337 313 ProSiteProfiles WRKY domain profile. 227 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g03337 313 SMART WRKY_cls 232 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g03337 313 MobiDBLite consensus disorder prediction 77 91 - -
Aip01g03337 313 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 292 IPR044810 GO:0003700
Aip01g03337 313 MobiDBLite consensus disorder prediction 77 158 - -
Aip01g03337 313 Pfam WRKY DNA -binding domain 234 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g03337 313 MobiDBLite consensus disorder prediction 176 208 - -
Aip01g03337 313 MobiDBLite consensus disorder prediction 284 313 - -
Aip01g03337 313 Pfam Plant zinc cluster domain 185 230 IPR018872 -
Aip01g03337 313 SUPERFAMILY WRKY DNA-binding domain 230 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip01g03337 313 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 292 - -
Aip01g03337 313 MobiDBLite consensus disorder prediction 108 158 - -
Aip01g03337 313 Gene3D WRKY domain 217 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03337 Aip-Chr1 136478664 136480103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03337 1 295 WRKY Transcription Factor Family AT2G24570 48.308 1.16e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip01g03337 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03337 - - gmx:732589 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03337 01 136478664 136480103 Aip03g02416 03 39262324 39264412 PCT