Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03321 ATGTCATCATCGTGTCTAAGTGGAGCTGGCGGAAGAACCTATGGCTTCGAATTCGAATTCGTTAAGTCAACATCTTCATCAATCACCAGAACTTCACACACTTCATCATCACCATCTTCAACAATCTCCGAATCCAGCAACAGCCAGCTGGCAATCTCCACGCGTAAGCCCAGAACCGCTCGCAAACGACCCAATCAAACCTATAACGAAGCCGCGGCGCTTCTCTCCACCGCATACCCCAACCTCTTCTCATCCAACACCCTCAAAAGCTTCGCCAAACCATCGCCGCAATACAGTAACGGTAATATTTCCAATACGGCGTCGTTTTTGGACGATTCGTCGGACCTGTTGTTGCCGTTCAGGGTGTTCGATACGTCGTCGTTTCTGCTCCACCAGTACAAGCCGTCGTGCTTCGCGGTGGAGCCTAAGGTGGTGAGTGTGCAGCACGAGAAGCCATGCCAGAGCCCAGGGGAGATAAGCTCCAGGGTGAATTCCTTGGAATTAGAGGACCATAATAATAACCATTGCGGCGCCGGAGAAGACGATTTCGATGCCGAATCGATGCTCGACGAGGAAATCGAGGAGGGAATTGATAGCATCATGGGGAGCGGGGTAGAATTGGAATCGTCCTCCATTGACGGAGCTTCTTCGGATAATAATCCGTGGAGTTGTTTTGGCGGGAAACTGGATTTCCGGCTAGGGTTGCGGAGGGCCGGAGTGAGGGCTCTCCGAAGCGCCGACGACGGCAATTGGTGGAATTTCCCGGCGGTTGATATCCTTCAGATATCGCCTAAGGCCGTAAACAAGCCTGCGCCGCAACAATCGGTGGCTGCGGCAGCTGAAAAGGCGAAGAAGAAGAAGAAGAAGGTGGAGAAACCGAGCGTTGAGGTGAAGAACAAGAACGATGAATTGCCGAAGCTGAATAATATTCATGCCGCTGTTCCGAAATTGAATTCCGGATTGATGTTGAAATTGAATTACGACGGTGTCAGGAATAGTTGGTCCGACCGGGGCTCGCCGTTCGGCGACGACGGCTCAGCCTCCGACTTGCCGGGAAATGACGTCACCGCACGATTGTCACAAATCGATTTGTTATGGGAGAATGGGGGAATGAGAGAGGCTAGCGTGCTTCGCTACAAAGAAAAGCGGCGTACACGCCTCTTCTCCAAGAAGATCAGGTACCAAGTCAGGAAGGTCAACGCAGATCGACGGCCCAGAATGCAGGGACGATTTGTTAGGAGGCCGATTTCTAGCTCAAATGCGCACAGATGA 1272 0.5204 MSSSCLSGAGGRTYGFEFEFVKSTSSSITRTSHTSSSPSSTISESSNSQLAISTRKPRTARKRPNQTYNEAAALLSTAYPNLFSSNTLKSFAKPSPQYSNGNISNTASFLDDSSDLLLPFRVFDTSSFLLHQYKPSCFAVEPKVVSVQHEKPCQSPGEISSRVNSLELEDHNNNHCGAGEDDFDAESMLDEEIEEGIDSIMGSGVELESSSIDGASSDNNPWSCFGGKLDFRLGLRRAGVRALRSADDGNWWNFPAVDILQISPKAVNKPAPQQSVAAAAEKAKKKKKKVEKPSVEVKNKNDELPKLNNIHAAVPKLNSGLMLKLNYDGVRNSWSDRGSPFGDDGSASDLPGNDVTARLSQIDLLWENGGMREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMQGRFVRRPISSSNAHR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03321 423 MobiDBLite consensus disorder prediction 28 65 - -
Aip01g03321 423 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 418 - -
Aip01g03321 423 MobiDBLite consensus disorder prediction 28 55 - -
Aip01g03321 423 ProSiteProfiles CCT domain profile. 372 414 IPR010402 GO:0005515
Aip01g03321 423 PANTHER OS02G0148000 PROTEIN 1 418 - -
Aip01g03321 423 Pfam CCT motif 372 414 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03321 Aip-Chr1 136320966 136324284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03321 321 414 C2C2-CO-like Transcription Factor Family AT1G25440 45.217 2.46e-20 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip01g03321 CCT 8.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03321 - - adu:107496352 753.821