Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03314 ATGAGGTTGTTGGAGTTTGGGTGTCTGGTTGCAGTTCTATGTGGTCTTCTTGTGTCTGTGAAAGCTGAGATTTACATCGTAACTGTTGAAGGTGAACCTGTTATTAGTTATGGAGGTGGAATTGATGGTTTTGAAGCTACTGCTGTTGAATCTGATGAGAAGATTGATACCAATAGTGAATTGGTTACTTCATATGCTCACCATCTTGAGAAAAAACATGATATGCTTCTGGGGATGCTGTTTGAACCTGGGACGTACAAGAAACTCTATAGCTATCGGCATCTGATAAATGGGTTTGCTGTTCATATTTCCCCAGAACAGGCAGAAACTCTAAGACATGCACCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGACTCACAACACATACGCCGCAGTTTCTTGGGCTTCCAACTGGAGTGTGGCCAACAGGAGGTGGCTTTGACCGGGCCGGAGAAGACATTGTGATTGGATTTGTGGATTCAGGGATCTATCCTCACCATCCAAGCTTTGCAACTCATAACACAGAACCATATGAGCCAGTTCCAAAGTACAGAGGAAAATGTGAAATTGATCCAGATACTAAAAAAAACTACTGTAACGGGAAGATTGTTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTGCCGGGGCATTTAACCCTTCGATGGATCTTGCATCTCCTCTAGATGGAGATGGACATGGAAGTCATACAGCCTCTATAGCTGCTGGAAATAATGGAATTCCTGTGAGGATGCATGGCCACGAATTTGGTAGAGCAAGTGGAATGGCTCCTCGTGCCAGAATTGCTGTGTACAAGGCACTCTACAGATTATTTGGAGGATTTATTGCAGACGTAGTTGCTGCAATCGATCAGGCTGTATACGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCGAACAGTCCTCCAGCAGCCACCAAAACCACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCTAAAACAATGGTTTCATATAGCCCATGGATAGCCTCTGTAGCAGCTGCAATTGATGATCGTAGATACAAAAACCATTTGACCCTTGGAAATGGAAAAGTCTTAGCTGGAATTGGGTTATCACCTGCTACACATTTAAACGAATCGTACACATTGGTTGCTGCAAATGATGTGCTGCTAGATTCTTCAGTGATGAAGTTCAGCCCCACAGATTGCCAGAGACCAGAACTTCTAAACAAGAGACTGATAGAGGGCAAAATTCTTCTCTGTGGATACTCTTTCAACTTCATTTCTGGTTCAGCATCAATAAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACGTTTCCCCAGAAACAAGATTTGACCCAGTTCCTGTTGGCCTTCCTGGGATTGTTATCGTAGATGTCAGAAACTCAAAGGAACTTGTTGATTATTATAATATTTCTACACCAAGAGATTGGACCGGACGAGTTAAGAGTTTCACAGGGAAAGGTAAAATTGGAGATGGTTTGATGCCTATCCTCCATAAATCTGCACCACAGGTAGCTTTATTCTCGGCTCGAGGACCGAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTCCTCAAACCAGATATATTAGCTCCCGGTTCATTGATTTGGGCTGCTTGGAGTCCAAATGGTACCGATGAGCCAAATTATGTTGGTGAGGGATTTGCCATGATATCCGGAACTAGTATGTCTGCGCCGCATATAGCTGGCATTGCTGCTCTTATAAAGCAGAAGCATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACGACAACATCGACATTAGATAGAGCAGGGAATCCTCTTCTAGCTCAACAAGCTTCTGAAACAGGAACTACAAAGCTTGTTAAAGCTACTCCATTTGATTATGGAAGTGGACATGTTGATCCAAGAGCTGCATTGGACCCTGGGCTGATCTTTGATGCAGGATATGAGGATTATCTAGGCTTTTTGTGCACAACACCAGGCATTGATGTTCATGAGATAAGGAACTACACTCACACACCATGTAACAAAACAATGGGCAAACCATCAAACTTAAACACCCCATCAATAACAATTTCCCATCTTGTGAGAACTCAAACCGTCACTCGAACTGTCACGAATGTTGCCGAGGAAGAAACCTACGTGATCACAGCCAGAATGGATCCGGCTGTTGCCATTGATGTCAACCCTCCTGCAATGACCGTCAGAGCAGGCGCATCGCGCAAGTTCTCCGTGACGCTCACCGTTCGAAGAGTGACCGGAACCTATAGTTTCGGAGAGGTTCTAATGAAAGAACAGAACAGAACAAACCTGCTTCTTCTCCTTGTTCTCCTCCTTAGCTTCTCCAATAATTTTGAGATGGTTGCAGAACAGAAGGACACAAAAGTTGTTCTGACTAAGCCATTCTCATTAGGAAGTGGATCAGTTTCAGACCCAGCTTATGGAGCCCCTAATCTCCTAAAACATGTCTTAACCCTTCTTAAAAATGTGAGGCTAGGATCAGATCTCACAAAATTCCAGCTGCCACCTATGTTTAATATCCCAAAGTCTCAACTTCAGTGCTATGGTGAATCAGTGTATAGCACAGGTTTGGATATGCTGAGCAGATGCAACAGTGGGGAGAGTCCTCTGGAGAGGTTCACCTCTGTGGTGGCATGGAGCATATCCACCACACGCCCTTCTCCTTTTGGGATTGCACCCTATAATCCTATTCTTGGAGAGACTCACCATGTCTCAAAAGGAAATCTTCATGTCCTACTAGAGCAGGTTTCACACAACCCTCCTGTATCAGCCCTCCATGCAACAGATGAGAAGGAAAACATTGAAATGATATGGTGCCAGCAATCCGTTCCAAGGTTTCGTGGTACATCAGTTGAAGCTCAAGTTCTTGGTAAAAGGCAGCTGAAGCTCCTAAACCATGGTGAAACATATGAAATGAATTCTCCTAATCTTTTCATTAGAATTCTTCCGGTTCCTGGTGTTGATTGGGTCGGCAATGTTAACATAAAGTGCCTAGAGAATGGCCTAGTGGCTAAGTTATCTTACAGATCAAGTTTATTTGGTGGACATGGTAGATACATCAGAGGCCAAATCCTTGATTCTTCATCAACAAAAGTTTTGTATGAAGTTCATGGTCATTGGGATAGTATTGTACAAGTGAAGGATACTAATAATGGGAAGGAGAGAGAGATATATAATGCAAAAGAAGTCATTTCAGGGCTCCAAGCTCCTATTGTCAAAGATGCTAAGAGTGTGTGGCCAACAGAATCAGGAGTTGTTTGGGGTGAATTGAGCCAAGCAATTCTAAACAAAGAGTGGGAGAAAGCAAGGGAAGCAAAACAAGCTGTGGAAGAAAGACAGAGGAACATGTCCAGAGAAAGAGAGACACAAGGATTGTACACTTGGACTCCTAAGAACTTTGTGGTGTCTTACAGTAAAGAAGCTGGTTGGGAATGTTCACCAATTCATAAATTGGTCCCTCCTGCTCCCATCATAGCACAATAA 3609 0.4359 MRLLEFGCLVAVLCGLLVSVKAEIYIVTVEGEPVISYGGGIDGFEATAVESDEKIDTNSELVTSYAHHLEKKHDMLLGMLFEPGTYKKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNTEPYEPVPKYRGKCEIDPDTKKNYCNGKIVGAQHFAQAAIAAGAFNPSMDLASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVYDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLTLGNGKVLAGIGLSPATHLNESYTLVAANDVLLDSSVMKFSPTDCQRPELLNKRLIEGKILLCGYSFNFISGSASIKKVSETAKALGAVGFVLCVENVSPETRFDPVPVGLPGIVIVDVRNSKELVDYYNISTPRDWTGRVKSFTGKGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMSAPHIAGIAALIKQKHPHWSPAAIKSALMTTTSTLDRAGNPLLAQQASETGTTKLVKATPFDYGSGHVDPRAALDPGLIFDAGYEDYLGFLCTTPGIDVHEIRNYTHTPCNKTMGKPSNLNTPSITISHLVRTQTVTRTVTNVAEEETYVITARMDPAVAIDVNPPAMTVRAGASRKFSVTLTVRRVTGTYSFGEVLMKEQNRTNLLLLLVLLLSFSNNFEMVAEQKDTKVVLTKPFSLGSGSVSDPAYGAPNLLKHVLTLLKNVRLGSDLTKFQLPPMFNIPKSQLQCYGESVYSTGLDMLSRCNSGESPLERFTSVVAWSISTTRPSPFGIAPYNPILGETHHVSKGNLHVLLEQVSHNPPVSALHATDEKENIEMIWCQQSVPRFRGTSVEAQVLGKRQLKLLNHGETYEMNSPNLFIRILPVPGVDWVGNVNIKCLENGLVAKLSYRSSLFGGHGRYIRGQILDSSSTKVLYEVHGHWDSIVQVKDTNNGKEREIYNAKEVISGLQAPIVKDAKSVWPTESGVVWGELSQAILNKEWEKAREAKQAVEERQRNMSRERETQGLYTWTPKNFVVSYSKEAGWECSPIHKLVPPAPIIAQ 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03314 1202 Pfam Fibronectin type-III domain 719 802 IPR041469 -
Aip01g03314 1202 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
Aip01g03314 1202 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
Aip01g03314 1202 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Aip01g03314 1202 SUPERFAMILY Protease propeptides/inhibitors 86 126 - -
Aip01g03314 1202 Gene3D - 369 534 - -
Aip01g03314 1202 CDD PA_subtilisin_like 376 514 - -
Aip01g03314 1202 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Aip01g03314 1202 Gene3D - 940 1110 - -
Aip01g03314 1202 SUPERFAMILY Oxysterol-binding protein-like 857 1187 IPR037239 -
Aip01g03314 1202 Pfam Subtilase family 154 636 IPR000209 GO:0006508|GO:0008236
Aip01g03314 1202 CDD Peptidases_S8_3 130 631 IPR034197 -
Aip01g03314 1202 Gene3D - 691 807 - -
Aip01g03314 1202 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Aip01g03314 1202 Pfam Peptidase inhibitor I9 25 127 IPR010259 -
Aip01g03314 1202 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 803 IPR045051 -
Aip01g03314 1202 Pfam Oxysterol-binding protein 863 1185 IPR000648 GO:0008289
Aip01g03314 1202 Gene3D - 1118 1166 - -
Aip01g03314 1202 PANTHER CUCUMISIN-RELATED 14 803 - -
Aip01g03314 1202 Coils Coil 1144 1164 - -
Aip01g03314 1202 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Aip01g03314 1202 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Aip01g03314 1202 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Aip01g03314 1202 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03314 Aip-Chr1 136262667 136271190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03314 4 813 Subtilisin-like Serine Gene Family AT4G30020 78.695 0.0 1329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03314 - - gmx:100787619 1426.38