Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03305 ATGGCAATCACGTTAATAGGGTCTTGCATGGTGAGGCCTAACGAGGCAACATGGTGTGGTCGCTTACCATTATCCGAATGGGACCAAATAGGAACCATCACACATGTTCCCACCATCTACTTCTATCATAAACCCACAACCTTACACACTTCCACCATTGTCAACACTTTGAAGGACTCTTTGAGTCGTGTGCTTGTACCATTTTACCCCTTGGCTGGTCGGTTACACTGGATAAATAACGGTCGTCTTCAGCTCGAATGCAACGCCATGGGAGCTCAGTTCATTGAAGCCGAATCGTCATCAACCCTAGAAGAGGTTGGTGACTTGTCACTTTCGTCCGAGTATCTCTACCACCTTTCTCCAAACGTAGACTATACTCTCCCGATTCATGAGTTGCCGCTGTTCATTGTTCAATTCACGACGTTCAAGTGTGGCGGATTCGGCCTCAGCTTGGCGATTTCTCATGCCATTGCCGATGGACAAAGTGCACTGCATTTTATCAACGAGTGGTCGAGGTTTGCGCGCGGTGAGGCCTTGGAGATGGTGCCGTTTCTTGATAGGAAAGTGTTGCGTGCCGGAGAACCACCTTTGGCGCCGTTGCCGGCTGGCCATGGGCGGTCGGAGTTCGAAAATCCTCCGTTGTTGCTGGGGCAGTCTACCAATATGGAGCAGAGGAAAAAGAAAACCACGGTGGAGTTTTTCAAGTTGAGCAAACAACAAGTTGATGGGTTGAGGAATTTGGCAAATCTTAGTTGGGGTAAACCTAGCAATGGACGTGGTTATACCAGGTACGAAACAGTAGCGGGGCACGTGTGGAGAAGCGCATGCAAGGCAAGGGAGCACAAAAATGACCAACCAACGTGTCTAGGGGTGTGTGTGGATTCAAGGTGTCGCATGAAGCCGCCATTGCCAAAAGGGTACTTCGGGAACGCAACCTTGGACGTGGTTGCAACCTCTCTTTCCGGTGATTTGGTTTCAAGGCCATTAGGGTATGCTTCAAGCAGAATAAGGGAAGCCATTGAGAAGGTGACTGATGAGTACATCAAGTCAGAGATTGAGTTCTTGAAGAACCAACAGGATTTGAGCAGGTTTCAGGATCTTCATGCCATGAGAAGTGACAAGGGTCCATTCTATGGTAACCCTAACATGGGTGTGGTCAGTTGGTTGACTTTGCCGGTCAACGGCCTTGACTTTGGATGGGGTAAAGAGGTTCAAATGTATCCCGGTACACATGAATTTGATGGTGATTCTGTTCTTCTTCCTGGTCTTGATAGTGATGGTTCTGTTGTTCTTGCTATATGTTTGCAAGTGGATCATATGGATGCATTTAGGAAGCATTTCTACCAAGAGGAATCATGCTAA 1362 0.4794 MAITLIGSCMVRPNEATWCGRLPLSEWDQIGTITHVPTIYFYHKPTTLHTSTIVNTLKDSLSRVLVPFYPLAGRLHWINNGRLQLECNAMGAQFIEAESSSTLEEVGDLSLSSEYLYHLSPNVDYTLPIHELPLFIVQFTTFKCGGFGLSLAISHAIADGQSALHFINEWSRFARGEALEMVPFLDRKVLRAGEPPLAPLPAGHGRSEFENPPLLLGQSTNMEQRKKKTTVEFFKLSKQQVDGLRNLANLSWGKPSNGRGYTRYETVAGHVWRSACKAREHKNDQPTCLGVCVDSRCRMKPPLPKGYFGNATLDVVATSLSGDLVSRPLGYASSRIREAIEKVTDEYIKSEIEFLKNQQDLSRFQDLHAMRSDKGPFYGNPNMGVVSWLTLPVNGLDFGWGKEVQMYPGTHEFDGDSVLLPGLDSDGSVVLAICLQVDHMDAFRKHFYQEESC 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03305 453 Gene3D - 1 204 IPR023213 -
Aip01g03305 453 Gene3D - 218 450 IPR023213 -
Aip01g03305 453 Pfam Transferase family 2 449 - -
Aip01g03305 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 8 450 - -
Aip01g03305 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 450 - -
Aip01g03305 453 SUPERFAMILY CoA-dependent acyltransferases 20 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03305 Aip-Chr1 136156592 136161259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03305 1 449 Monolignol Biosynthesis Gene Families AT5G48930 38.667 1.91e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03305 K13065 - gmx:100777007 622.083