Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03288 ATGAAATACATTCGGACCAGCAGCTTGAAGAGGCTCTTCTCTCTGAAAAGGCGTAGTTTTGGAGACCATTTTTTGGGTTCAGAGAATTTGGTTGGAAAAGGAGGGTATGCAGAGGTATACAAGGGAACACTGAAGGATGGAGAGAAGATTGCAGTGAAGAGGCTCACAAGAACTTGCAGAGATGAGAGGAAAGAGAAAGAGTTTCTAACAGAGATTGGTACAATCGGTCATGTCCACCATAACAATGTTTTGCCTCTTCTTGGTTGTTGTATTGACAATGGCCTTTACCTTGTTTTCATGCTATCTACCAGAGGCTCTGTTGCATCCCTTCTTCATGATGAAAAGTTGGATACTTTGGATTGGAAAACAAGGCATAAGATAGCTGTTGGAACTGCACGTGGCCTCCATTACTTGCACAAAGGTTGCAAGAGAAGGATAATCCACCGAGACATTAAGGCATCAAATATTCTTTTGACAGAAGATTTTGAACCTCAGATATCTGATTTTGGATTAGCAAAATGGCTTCCATCTCAATGGAGTCATCATTCAATTGGCCCAATAGAAGGGACATTTGGTCATTTGGCACCAGAATACTATCTGCATGGAGTTGTGGATGAGAAGACAGATGTATTTGCTTTTGGTGTGTTCTTGCTTGAACTCATTTCTGGAAGAAAACCGGTTGATGGGTCTCACCAAAGCTTGCATACTTGGGCAAAACCAATATTGAAGAAAGGGGAGGAAGAGAAGCTTGTGGATCCAAGGCTTGAAGGGGAGTATGATGGAGGAGAGTTAAAGAGACTTGCCTTTGCAGCATCCTTGTGCATTCGAGCTTCTTCAATTTGGCGACCAACCATGACTCAGGTATTAGAGGTAATGGAAGAGGGTGAAATTGACAAAGAGAAGTGGAAAATGCCAGAGGAAGAAGAAGAGGAAGATGAAGAGGAAGAGTTTTGGGGTTTTGATGATCTTGAATATGAATATGACACTTCATTATCAATGTCACTACCTGATTCCACTGCAAGTACATATATTTAG 1035 0.4164 MKYIRTSSLKRLFSLKRRSFGDHFLGSENLVGKGGYAEVYKGTLKDGEKIAVKRLTRTCRDERKEKEFLTEIGTIGHVHHNNVLPLLGCCIDNGLYLVFMLSTRGSVASLLHDEKLDTLDWKTRHKIAVGTARGLHYLHKGCKRRIIHRDIKASNILLTEDFEPQISDFGLAKWLPSQWSHHSIGPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLELISGRKPVDGSHQSLHTWAKPILKKGEEEKLVDPRLEGEYDGGELKRLAFAASLCIRASSIWRPTMTQVLEVMEEGEIDKEKWKMPEEEEEEDEEEEFWGFDDLEYEYDTSLSMSLPDSTASTYI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03288 344 ProSitePatterns Protein kinases ATP-binding region signature. 31 53 IPR017441 GO:0005524
Aip01g03288 344 Gene3D Phosphorylase Kinase; domain 1 20 100 - -
Aip01g03288 344 Coils Coil 52 72 - -
Aip01g03288 344 Gene3D Transferase(Phosphotransferase) domain 1 103 318 - -
Aip01g03288 344 Pfam Protein tyrosine and serine/threonine kinase 29 233 IPR001245 GO:0004672|GO:0006468
Aip01g03288 344 ProSiteProfiles Protein kinase domain profile. 25 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03288 344 PANTHER OS08G0249100 PROTEIN 11 324 - -
Aip01g03288 344 SMART serkin_6 25 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03288 344 SUPERFAMILY Protein kinase-like (PK-like) 27 292 IPR011009 -
Aip01g03288 344 PANTHER OS04G0654600 PROTEIN 11 324 - -
Aip01g03288 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03288 Aip-Chr1 136013343 136017425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03288 9 303 Receptor kinase-like Gene Family AT1G60800 45.215 2.16e-69 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip01g03288 PK_Tyr_Ser-Thr 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03288 - - aip:107642468 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03288 01 136013343 136017425 Aip01g03288 01 136013343 136017425 ECH